Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01873 ATGATTGTGAGTGTGAGAGGGATCATAGGTAGCGGCGATGGCGATGAAGAACTTGTACTGGTTGAAGGAAATGTCGAACAACGAGAGGGAGAAGAGGAATGGAGTGCTGATCTGTCACAGCTGTTCATAGGTTCGAAATTCGCTTCTGGAAGGCACAGCAGGATCTACAGAGGGATATACAAGCACATCGATGTTGCCATCAAGCTTGTGAGCCAGCCTGAGGAGGATGAGGAATTGGCTGCTCAGCTTGAGAACCACTTCACTTCTGAGGTTGCGCTTCTCTTTCGCTTGCACCATCCTAATATCATTACTTTTGTAGGAGCTTGCAAGAAGCCCCCTGTATTTTGCATAATCACAGAATACTTAGCTGGTGGCTCATTGAGAAGCTTCCTTCAAAGGCAAGGACCACATTCACTCCCTCTAGAACTTGTTCTAAAGCTAGCCTTAGACATTGCCAAGGGTATGCAATACCTTCACTCTCAGGGCATACTCCACAGGGACCTCAAATCAGAGAATCTTCTCTTGGGTGAAGACATGTGTGTCAAAGTAGCAGACTTTGGGATCTCGTGCTTAGAATCCCAGATTGGTAGTGCTAAAGGGTTCACTGGAACTTACCGTTGGATGGCGCCAGAAATGATCAAGGAGAAGCACCATACCAAGAAAGTAGATGTTTACAGTTTCGCCATTGTTCTTTGGGAGCTTCTAACAGGACTAACACCCTTTGAGAATATGACACCAGAACAGGCAGCATTTGCAGTGACTCACAAGAATGCAAGGCCTCCATTACCATGTGATTGTCCATGGGCATTTAGTAATCTAATAAACAAATGCTGGTCAAGCAATCCGAAAAAACGACCACACTTTGATGAGATAGTCACTATTTTGGAGAGCTACATAGAATCACTGGAAAAAGATCCTGAATTTTTCACCAATTACAAACCACGTCGTCCACGTAATCTGGTTCTCAAATGCTTACCAAAGTGTAACTGTCGCCATGTATCCTCTTCTTCCAAATCTTAG 1020 0.4461 MIVSVRGIIGSGDGDEELVLVEGNVEQREGEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHIDVAIKLVSQPEEDEELAAQLENHFTSEVALLFRLHHPNIITFVGACKKPPVFCIITEYLAGGSLRSFLQRQGPHSLPLELVLKLALDIAKGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWELLTGLTPFENMTPEQAAFAVTHKNARPPLPCDCPWAFSNLINKCWSSNPKKRPHFDEIVTILESYIESLEKDPEFFTNYKPRRPRNLVLKCLPKCNCRHVSSSSKS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01873 339 CDD STKc_MAP3K-like 48 295 - -
Adu01g01873 339 PRINTS Tyrosine kinase catalytic domain signature 203 213 IPR001245 GO:0004672|GO:0006468
Adu01g01873 339 PRINTS Tyrosine kinase catalytic domain signature 157 175 IPR001245 GO:0004672|GO:0006468
Adu01g01873 339 PRINTS Tyrosine kinase catalytic domain signature 119 132 IPR001245 GO:0004672|GO:0006468
Adu01g01873 339 PRINTS Tyrosine kinase catalytic domain signature 222 244 IPR001245 GO:0004672|GO:0006468
Adu01g01873 339 PRINTS Tyrosine kinase catalytic domain signature 266 288 IPR001245 GO:0004672|GO:0006468
Adu01g01873 339 Gene3D Transferase(Phosphotransferase) domain 1 123 321 - -
Adu01g01873 339 Pfam Protein tyrosine and serine/threonine kinase 43 295 IPR001245 GO:0004672|GO:0006468
Adu01g01873 339 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 23 317 - -
Adu01g01873 339 PIRSF ILK 21 313 - -
Adu01g01873 339 Gene3D Phosphorylase Kinase; domain 1 30 122 - -
Adu01g01873 339 SUPERFAMILY Protein kinase-like (PK-like) 31 295 IPR011009 -
Adu01g01873 339 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01873 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Adu01g01873 339 PANTHER SERINE-THREONINE PROTEIN KINASE 23 317 - -
Adu01g01873 339 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01873 Adu-Chr1 79378807 79383286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01873 18 328 MAP Kinase Kinase Kinase AT1G62400 59.683 5.04e-135 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Adu01g01873 PK_Tyr_Ser-Thr 4.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01873 - - ahf:112695517 643.269