Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01854 atgccgtgtccaacttgttggagcttgagGTGCGTGTTCTCTAACTCCGGCATCTCTTCCAGCTGCGGTTTCTCCTTCACTTCACAATCACATTCACCAATACCACAGGTTTCAACAATGGTTAGAAAAAAGGCAGATGATGCAGGCCCATCAGCAAAGACTAAGGCAAGTAGCAAAGATGCCCCAAAGAAAGAAAAAATTTCCATATCTGCCATGCTGGCCAGCATGGATGAAAAGCCTGATAAACCCAAAAAGCCCTCTTCCACTAAGCCCAAGGCAAAAGCCGCTCCAAAACCTTCTGCATATACTGATGGTATTGATCTTCCACCATCTGATGAAGATGAAGATGAAGCTATCTTGGAGGAGGAGGAAGAGAATGCCTCCAAACGGCATCAGAGGAGTGAGTTGAAGACACTTGAAGTATCAACCACAGACAAAGAGCTGAAGAAGCGTGAGAAGAAGGATATTTTAGCGGCTCATGCTGTTGAGCAGGCAAAGAAGGAAGCTCTTAAGGATGACCACGATGCTTTCACGGTGGTCATTGGAAGTCGGACTTCAGTGCTTAATGGAGATGATGATGCCGATGCTAATGTCAAAGATATAACAATAGAAAATTTCTCGGTGTCTGCTCGGGGTAAAGAACTTCTGAAGAATGCGTCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGACCCAATGGAAAGGGGAAGTCCACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCGGTACCTAAGAATATTGATGTCCTTCTGGTTGAACAGGAGGTAGTTGGTGATGATAAAACCGCACTTGAGGCTGTTGTTTCAGCTAATGAAGAACTGGTTAAAGTTCGACAAGAAGTTGCTTCTTTGCAAAATGCAACTGCTTTGGAAGGAAGTGTTGACAAAGATAATAATGATGAGGAAGATGATGCAGGAGAGAAGCTAGCAGAGCTGTACGAGAAACTACAGCTGATGGGTTCTGATGCTGCTGAAGCTCAAGCATCAAAGATTTTAGCAGGTTTGGGTTTCACGAAGGATATGCAGGGCCGGCCAACAAAATCATTTAGTGGTGGATGGAGAATGAGGATTTCTTTAGCTCGAGCACTTTTTGTGCAGCCAACTTTATTATTGCTTGATGAACCCACAAATCACCTTGACTTGAGGGCTGTTCTCTGGTTGGAAGAGTACCTGTGCCGTTGGAAGAAGACTTTGGTGGTTGTCTCACACGATAGGGATTTCCTCAATACAGTTTGCACTGAGATTATTCATCTTCATGACTTGAAACTCCATTTCTATCGTGGAAACTTTGATGACTTTGAGAGTGGGTATGAACAGCGTCGTAAAGAGATGAACAAGAAGTATGAGATTTATGACAAGCAACTGAAAGCTGCAAAAAGGAGTGGTAACCGAGCTCAGCAAGAAAAGGTGAAGGACCGAGCGAAGTTTGTGGCAGCCAAAGAAGCATCTAAAGCCAAGGGCAAAGGCAAGGGCAAGGTTGATGAAGATGAGGCCCCACCAGAGGTTCCACAGAAGTGGAGGGACTACAGTGTCGAGTTTCACTTTCCTGAACCTACCGAGCTCACACCTCCACTACTTCAGCTTATTGAAGTGAGCTTCAGTTATCCGAACCGTGAGGATTTCAGACTGTCAAATGTTGATGTTGGCATTGATATGGGAACTCGTGTTGCCATTGTTGGGCCTAATGGAGCTGGAAAATCTACACTACTGAACCTTCTGGCTGGTGATTTGGTTCCAAATGAGGGTGAAGTTAGGAGGAGTCAGAAGTTGCGGATAGGAAGATACTCGCAACACTTTGTGGACCTTCTAACTATGGACGAAACCCCCGTTCAGTATCTTCTTCGTCTCCATCCTGATCAGGAGGGACTTAGCAAGCAAGAGGCTGTCCGCGCAAAACTCGGAAAGTTTGGGCTACCTAGTCATAACCATCTCACGCCTATTGCCAAACTATCAGGAGGGCAGAAAGCTAGGGTGGTCTTCACCTCAATATCCATGTCAAGACCCCATATTTTGTTGTTGGATGAACCCACTAATCATCTGGACATGCAAAGTATTGATGCATTGGCCGATGCACTAGACGAGTTCACTGGTGGAGTTGTTCTTGTTAGTCATGACTCGAGATTGATATCGCATGTATGTGAGGATGAAGAGAGGAGTCAAATCTGGGTTGTTGAGGATGGTACTGTCAGGACTTCGGTTGGAACATTTGACGATTACAAAACCGAGTTGATGAAAGAAATCAAAGCTGAAGTTGATGATTGA 2292 0.4433 MPCPTCWSLRCVFSNSGISSSCGFSFTSQSHSPIPQVSTMVRKKADDAGPSAKTKASSKDAPKKEKISISAMLASMDEKPDKPKKPSSTKPKAKAAPKPSAYTDGIDLPPSDEDEDEAILEEEEENASKRHQRSELKTLEVSTTDKELKKREKKDILAAHAVEQAKKEALKDDHDAFTVVIGSRTSVLNGDDDADANVKDITIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKVRQEVASLQNATALEGSVDKDNNDEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKYEIYDKQLKAAKRSGNRAQQEKVKDRAKFVAAKEASKAKGKGKGKVDEDEAPPEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPNEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISHVCEDEERSQIWVVEDGTVRTSVGTFDDYKTELMKEIKAEVDD 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01854 763 Coils Coil 451 471 - -
Adu01g01854 763 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 43 763 - -
Adu01g01854 763 MobiDBLite consensus disorder prediction 123 148 - -
Adu01g01854 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 457 IPR027417 -
Adu01g01854 763 MobiDBLite consensus disorder prediction 490 511 - -
Adu01g01854 763 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 201 462 IPR003439 GO:0005524
Adu01g01854 763 MobiDBLite consensus disorder prediction 108 122 - -
Adu01g01854 763 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 536 761 IPR003439 GO:0005524
Adu01g01854 763 ProSitePatterns ABC transporters family signature. 359 373 IPR017871 GO:0005524
Adu01g01854 763 MobiDBLite consensus disorder prediction 26 148 - -
Adu01g01854 763 CDD ABCF_EF-3 201 432 - -
Adu01g01854 763 CDD ABCF_EF-3 536 738 - -
Adu01g01854 763 Pfam ABC transporter 553 688 IPR003439 GO:0005524
Adu01g01854 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 515 745 IPR027417 -
Adu01g01854 763 Gene3D - 502 763 IPR027417 -
Adu01g01854 763 Coils Coil 277 297 - -
Adu01g01854 763 PANTHER - 43 763 - -
Adu01g01854 763 Pfam ABC transporter 216 387 IPR003439 GO:0005524
Adu01g01854 763 Gene3D - 198 483 IPR027417 -
Adu01g01854 763 SMART AAA_5 562 738 IPR003593 -
Adu01g01854 763 SMART AAA_5 225 431 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01854 Adu-Chr1 74984285 74988618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01854 535 748 Calmodulin-binding Proteins AT2G36910 29.289 1.07e-15 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01854 K06184 - gmx:100806865 1196.8