Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01849 ATGTCTCATCTCCATGATGATGTTTCGGTGACAATTCAACCACCACCTGCATATCTTGATTTGATTAGTTCACTAGTGAACCACAGTGTGATCTCGGTAACTAATCCACCCACCAATCCACCCACCAGACTGGATTCCATTGGGACGGAGTTCGATCCAGATATCTTGAAGGTTCGTCATGAAGGTGTAATCAGTGCCTTATACGCTGATCTTCCTAGACGATGCACGAGCTATGGACTCCGATTCAAATGGCAAGATGAGCACAATAGACATATGGATTAG 282 0.4468 MSHLHDDVSVTIQPPPAYLDLISSLVNHSVISVTNPPTNPPTRLDSIGTEFDPDILKVRHEGVISALYADLPRRCTSYGLRFKWQDEHNRHMD 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01849 93 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 11 93 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Adu01g01849 93 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 11 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01849 Adu-Chr1 74683872 74684232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01849 8 93 C2H2 Transcription Factor Family AT4G04885 49.425 7.64e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01849 K14400 - ahf:112721559 115.161