LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu01g01842	ATGGACACCCTCCAATTTTTCCTCTTCATATTCCAGCTTTTACTCTGCCTCAACCCAATCTCCGCGGTGGACTTCCTCTTCAACTCCTTCACCGGCGCCACCAACACCACCAACGTGACCCTCATCGCCGACGCGCTCGTAGACTCCTCCGTCGTCCGCATGACCAACGACTCCAACCAATACTCCTTCGGCAGAGCCTTCTACACTAAAAAAGTCACCATCAAGAAACCCTTCCCTTCTTCTTCTTCTTCTTCAAGCAACTTCTCTTCCTTCTCGGCCTCCTTCGTCTTCTCCATCTTGCCGCAGATCCCGACGAGTCCCGGATTTGGCCTCGCTTTCGTTCTCTGCAACACAACCTCCCCTCCCGGCGCACTCGCCAGCCAGTACTTCGGTCTCTTCACCAACGCCACCTCACCTCCCCTGTTCCCGCTCCTCGCCGTCGAGTTTGACACAGGCCAGAACCCTGAGTTCGGCGACCCCGACGACAACCACCTCGGCATCGACCTCAACAACATCGTTTCCAAGAAAACTCAGCCCGCAGGGTACTACAACTCCACCGGAGGATTCGTCCCCCTCCGAATGCGAACGGGACAGAACGTTCACGCTTGGATCGATTTCGACGGCGAGACTATGCAGATCAACGTCACCGTCGCTCCGGTGGGGCTTCCCCGCCCGAAGAAACCAACTCTCTCGTACACAGACCCGGAAATGGCGAACTACTTGTCTTCTGATATGTTCGTTGGGTTCTCTGCTTCGAAAACCAATTGGATCGAGGAACAGAGAGTACTCGCATGGAGTTTCAGCACTTTAGGTTCCGCAAGAGACATAAATACAACTAATTTACCAGTTTTCCAGCCTACAACCTCCTCTTCCTCTCTCTCCGGCGGCGCAATCGCCGGAATCGTTCTTGGCTGCGTCGCTTTCGTGGCAATCTTTGTCTCGATCTGTTACCTGTGGTGGCGAAAGAAGATGAAGGAGGAAGAAGAAGAGATCGAGGATTGGGAACTGGAGTACTGGCCCCACAGATTCTCCTACGACGAACTCAGAACCGCAACGGGAGAATTCAGGAGGGAGAACCTTCTAGGCTCCGGCGGGTTCGGAAGAGTATACAGAGGAATGCTTCAGAACAAAACAGAGGTTGCCGTGAAATGCGTCAACCACGACTCAAAGCAAGGCGTGAGGGAATTCATGGCGGAAATTTCAAGCATGGGGAGGCTGCAGCACAAGAACTTGGTCCAAATGAGAGGGTGGTGCAGAAAAGGAAACGAGCTTATGCTGGTTTATGACTTCATGCCCAACGGGAGCCTCAACAAGTGGGTGTTTGACAACCCGCCGAAGCTTCTAGAATGGGGGAGGAGGCGAAGGGTGCTCGTCGACGTGGCGGAGGGGCTCAACTACCTTCACCACGGGTGGGACCAGGTTGTTATTCACAGGGATATTAAGTCTAGTAATATCTTGCTAGACTCTGACATGAGGGGGAGGCTTGGGGACTTTGGTTTGGCGAAGCTATACCAGCAGGGGGAGGTTCCCAACACCACGCGTGTCGTTGGCACATTGGGGTACCTCGCGCCAGAGTTGGCTACTGTGGCGGTGCCAACTTCGGCGAGTGATGTTTATAGTTTTGGAGTGGTGCTTTTGGAGGTGGCATGTGGGAGGAGGCCGATTGAGACGTCGGCGGCGGAAGAGGAGGTGGTGCTAATTGACTGGGTGAAGGAGCTGTACGCCAGTGGGAGGATGTGTGAGGCTGCGGACCCGAGGATTGAAGGGGAGTATGAGGTTGGGGACATGGAGATGGTGCTCAAGCTTGGGTTGGCTTGTTGCCACCCTGAGCCTCAGAGGAGGCCAACGATGAAGGAGGTGGTTGCAGTGCTTGTGGGGGACAATGTTGCGGAGGAGCCGGGGAAAGTGTTGTCTGATTTGGTGCGTGGCGACGGTGGTGGTCTGGAGAAAGAGGAGGAGACCACGGCTTTACAGGGAAACCTTCCGGATTGA	1992	0.5472	MDTLQFFLFIFQLLLCLNPISAVDFLFNSFTGATNTTNVTLIADALVDSSVVRMTNDSNQYSFGRAFYTKKVTIKKPFPSSSSSSSNFSSFSASFVFSILPQIPTSPGFGLAFVLCNTTSPPGALASQYFGLFTNATSPPLFPLLAVEFDTGQNPEFGDPDDNHLGIDLNNIVSKKTQPAGYYNSTGGFVPLRMRTGQNVHAWIDFDGETMQINVTVAPVGLPRPKKPTLSYTDPEMANYLSSDMFVGFSASKTNWIEEQRVLAWSFSTLGSARDINTTNLPVFQPTTSSSSLSGGAIAGIVLGCVAFVAIFVSICYLWWRKKMKEEEEEIEDWELEYWPHRFSYDELRTATGEFRRENLLGSGGFGRVYRGMLQNKTEVAVKCVNHDSKQGVREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDFMPNGSLNKWVFDNPPKLLEWGRRRRVLVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSDMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELATVAVPTSASDVYSFGVVLLEVACGRRPIETSAAEEEVVLIDWVKELYASGRMCEAADPRIEGEYEVGDMEMVLKLGLACCHPEPQRRPTMKEVVAVLVGDNVAEEPGKVLSDLVRGDGGGLEKEEETTALQGNLPD	663

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu01g01842	663	PANTHER	-	7	655	-	-
	Adu01g01842	663	SMART	serkin_6	355	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu01g01842	663	Pfam	Protein kinase domain	356	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu01g01842	663	Gene3D	-	21	285	-	-
	Adu01g01842	663	Gene3D	Transferase(Phosphotransferase) domain 1	431	633	-	-
	Adu01g01842	663	SUPERFAMILY	Protein kinase-like (PK-like)	332	624	IPR011009	-
	Adu01g01842	663	Coils	Coil	317	337	-	-
	Adu01g01842	663	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1	7	655	-	-
	Adu01g01842	663	CDD	lectin_legume_LecRK_Arcelin_ConA	23	269	IPR001220	GO:0030246
	Adu01g01842	663	CDD	STKc_IRAK	361	624	-	-
	Adu01g01842	663	Gene3D	Phosphorylase Kinase; domain 1	340	430	-	-
	Adu01g01842	663	ProSitePatterns	Protein kinases ATP-binding region signature.	361	383	IPR017441	GO:0005524
	Adu01g01842	663	SUPERFAMILY	Concanavalin A-like lectins/glucanases	21	284	IPR013320	-
	Adu01g01842	663	Pfam	Legume lectin domain	23	281	IPR001220	GO:0030246
	Adu01g01842	663	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	475	487	IPR008271	GO:0004672\|GO:0006468
	Adu01g01842	663	MobiDBLite	consensus disorder prediction	640	663	-	-
	Adu01g01842	663	ProSiteProfiles	Protein kinase domain profile.	355	630	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu01g01842	663	ProSitePatterns	Legume lectins beta-chain signature.	145	151	IPR019825	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu01g01842	Adu-Chr1	73977849	73980367	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu01g01842	21	626	Receptor kinase-like Gene Family	AT1G15530	66.667	0.0	803

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Adu01g01842		Pkinase	4.8e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu01g01842	-		-	lang:109362483	998.808