Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01840 ATGGCTGGTGGTGAAGTTTTGAGGCAGAATTTACCTGAGAAGCTTGAGGAATCTCCTTCTGGTGCAAATGAGCTTCATGTTTTAGCTGTTGATGATAGTCTTGTGGATAGAAAGGTCATTGAACGCTTGCTCAAGATATCTTCTTGCAAAGTGACAGTGGTGGAGAGTGGAACTAGAGCTCTTCAGTATTTGGGGTTGGATGGGGATAAGAAAAGCTCCATTGGATTTGATAGTGTGAAGGTTAATTTGATAATGACTGATTATTCGATGCCGGGGATGACTGGTTATGATCTTCTCAAGAAAATCAAGGTGTGTAATTTGTTCTTAACAGATTGA 336 0.4048 MAGGEVLRQNLPEKLEESPSGANELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKKSSIGFDSVKVNLIMTDYSMPGMTGYDLLKKIKVCNLFLTD 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01840 111 Pfam Response regulator receiver domain 27 103 IPR001789 GO:0000160
Adu01g01840 111 MobiDBLite consensus disorder prediction 1 20 - -
Adu01g01840 111 SUPERFAMILY CheY-like 23 103 IPR011006 -
Adu01g01840 111 Gene3D - 7 106 - -
Adu01g01840 111 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 106 IPR045279 GO:0009736
Adu01g01840 111 ProSiteProfiles Response regulatory domain profile. 26 111 IPR001789 GO:0000160
Adu01g01840 111 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 9 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01840 Adu-Chr1 73495024 73495551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01840 4 108 Response Regulator Gene Family AT3G48100 66.355 8.17e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu01g01840 Response_reg 2e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01840 K14492 - gmx:100796843 166.007