Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01815 ATGGAAGGTCCTGTCATCAACGAGTCCACATTCTCCTCCGCCAACCCTTCCTCTTACTCTCTCTCTGAGATTTGGCCCGCCACCGCAACCACCTTCACTCCCATCCACAACCATAAGAGGAAGGAATCATCCCCCTCCTCCTCCACCACCACCGCCACCGCCAATCACTTGTTAGCTCGGCAAGGTGGTGGTGGCGGCGGCGGCGGCGGCGCTGCTAAGCCTTCTTGTGAGCAACCGCCTAAACAAGACTACATCCATGTGAGAGCCAGGAGAGGCCAGGCTACCGATAGCCACAGTCTCGCTGAGAGAGCCAGGAGAGAAAAGATTAGTGAGAGGATGAAAATTCTTCAAGATTTAGTCCCTGGATGTAACAAGGTAATTGGCAAAGCACTTGTGTTAGATGAGATAATCAATTACATACAGTCGCTGCAGCGTCAGGTTGAGTTCCTTTCAATGAAGCTTGAAGCAGTTAATTCAAGATTGAACATGAATTCTGTTGTTGAATGTTTTCCTTCAAAAGACGTTGGTAATCAGCCATTTGATATTGCCGGAATGATATTCGGATCACAAGCAACCAGGGGGTATGCACAGGGATCACAATCTGGATGGCTGCATATGCAATTAGGAGGTGATTTCGATAGAGTG 645 0.4899 MEGPVINESTFSSANPSSYSLSEIWPATATTFTPIHNHKRKESSPSSSTTTATANHLLARQGGGGGGGGGAAKPSCEQPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNMNSVVECFPSKDVGNQPFDIAGMIFGSQATRGYAQGSQSGWLHMQLGGDFDRV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01815 215 MobiDBLite consensus disorder prediction 58 79 - -
Adu01g01815 215 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 143 IPR011598 GO:0046983
Adu01g01815 215 SMART finulus 99 149 IPR011598 GO:0046983
Adu01g01815 215 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 91 162 IPR036638 GO:0046983
Adu01g01815 215 MobiDBLite consensus disorder prediction 33 52 - -
Adu01g01815 215 Gene3D - 90 168 IPR036638 GO:0046983
Adu01g01815 215 Coils Coil 140 160 - -
Adu01g01815 215 CDD bHLH_AtBPE_like 83 165 - -
Adu01g01815 215 PANTHER BNAC05G07950D PROTEIN 75 214 - -
Adu01g01815 215 Pfam Helix-loop-helix DNA-binding domain 97 144 IPR011598 GO:0046983
Adu01g01815 215 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 75 214 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01815 Adu-Chr1 71655940 71659152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01815 1 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 43.617 5.01e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu01g01815 HLH 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01815 - - gmx:100799646 271.937