Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01788 ATGCATACAATTAACTTAATTGTTAGAATTAGCTGGACACTCAATATTTGGTTATCAACTATTACTGCCGCCCTATTCCTCCCCGTCTCCTCCTCCGCACTCGCACCTCTTCGTCCCATTCCCCTCCGTCGCAACCGCACCTTCTTCCTCCCCTTTCCCTCCATCGCAATAACGTCCTCTTACTCCCCTTCCCTTCCATCGCAATCGCGGCCTCTTCCTCCCCTTCCCCTCCGTCACAATCGCACCGTCCCTCCCTATTTCCACCACCGAGAACGACCGAAGCCTTCCCACTCAGATAACGAGTCTGTTCAAGCGGATCGAAGCCCACAAATAGCCTCACCTCTGACGACGACGGAGCCCGATCTGCATTGTCGGACTGCAATTTTCTTTGGAGGACATCTCCCAATTTTGCGTGTTTCGCTAAATTACCGCATTGTTGCTGTTTGGCACAGGGTTGCCGGGGATGAAGATACCACTGGGGGCGTGGGTGTTGCCGATGAACCAGAAATGTCTGACGGAGCAGAGGACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCAGGGATGGACGACTTTCAGGAAGACGATACAGAACACGACCGTCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTAGAAGACGGTTTGGACGGCGCCGGAGGAATGTCTGAGAATTATGCGGAAGACGAGTTTTACGCCGTTGATTCCGGCGAGTCCATAGGTTGGATTGATTTTTTGAACCTGAGCGCGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTATCAGCAATATGCAAAGCACCATGGATTCGGCGCAAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTACCACCGACAAGGGTTCCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGTTACTCCGCATGGACGATTAA 1020 0.5275 MHTINLIVRISWTLNIWLSTITAALFLPVSSSALAPLRPIPLRRNRTFFLPFPSIAITSSYSPSLPSQSRPLPPLPLRHNRTVPPYFHHRERPKPSHSDNESVQADRSPQIASPLTTTEPDLHCRTAIFFGGHLPILRVSLNYRIVAVWHRVAGDEDTTGGVGVADEPEMSDGAEDGVGSFEGEGSAGMDDFQEDDTEHDRHAEADVDNGDAVELEDGLDGAGGMSENYAEDEFYAVDSGESIGWIDFLNLSAEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRSEKRGEVRIRQEFVYHRQGFRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDD 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01788 339 Pfam FAR1 DNA-binding domain 269 338 IPR004330 -
Adu01g01788 339 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 200 335 - -
Adu01g01788 339 MobiDBLite consensus disorder prediction 84 101 - -
Adu01g01788 339 MobiDBLite consensus disorder prediction 102 118 - -
Adu01g01788 339 MobiDBLite consensus disorder prediction 83 118 - -
Adu01g01788 339 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 200 335 - -
Adu01g01788 339 MobiDBLite consensus disorder prediction 192 209 - -
Adu01g01788 339 MobiDBLite consensus disorder prediction 156 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01788 Adu-Chr1 69333134 69334264 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g01788 FAR1 2.5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01788 - K17604 ahf:112779874 355.91