Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01715 ATGGGGAAGGCATCAAAACTGACGAGCAGTAGCGGTAGGTCCGCCAACGCTGGAAGCGTGACCGCCGCTAGTAGCCAAGATTGGGCCGCCATTAAGATTCAATCCGCCTTCCGAGGATGTTTGGCAAGGAGAGCATTACGGGCACTGAAAGGATTAGTTAAGCTTCAAGCACTTGTGAGAGGCCACATCGAAAGAAAGCGAACAGCACAACAGATGAAAAAATGGCAAGCACTTTTAAGAGCACAAGCTAGAGTCTGTGCTCGCAGAGTTCATATCCTTCAAGCCCCAAATTCCACTTCTAAGTCACCTTCCTGCCACCTTCATGGGCCAGCAACACCAGACAAGTTTGAAAGCCCAATCAGATCTAAGAGCATGAAAGATGAGCACTCACCATTGCTTAAGAGAAATGGCTCCAAATCATGCCTCCAGCAGGTCCATGGTAGTAGCGGGCAAGAGAAATGTAGGAACAAATCAGAAAGGCACATAGATGAACTAACATGGAACCAAGAAAAATCATCAATGAGAACCTCTAGCACCACCAATGGTGACAAAAGTGACAAGAACCCTGAAATTGATTCCAGAAGATCACAAGCCACGTCATCATCAAGACGTAGGAACCTCTTTTCCACCACCAACAACCATGTCTTAGTTTCTGATCAGCATTGCATTAGTAGCAAGAGTTACACCACAAGCAACCACAACAACAACAACAAGGAATCATCATCAGTGATATCTCTTCAATCAGGCCCAAGCCCATCTTGTGAGGTCCAGTCTCAGAGCCCAATGAAGCCCAATTGGGTTGAGGAGAGCCCATTCTGTACAGCTGAAAACAGCCCCCAATACCTATCAGCATCTTCCAAAGATAATGTACCCAAAAGAAGCCCTTTTGGTGGGTCAAGGAGTTATATTTGTGACTATTCTGATTACCCAAGTTACATGGCATGCACTGAATCTTCAAAGGCAAAAGTGAGGTCTCTTAGTGCCCCAAAACAAAGGCCCAACCAATGTGATAGGTCTAGTTCATCTACTAGGTACTCACTCAATGGATTGGGTTGTCAGAGGCCCAATTATGCTTTGCAAGGATGCTTCACCAACAAGGGTTATCCAGGTTCTGGTCGTTTGGACAAGCTTGGAATGCCTGTGGGATATAGATTCTAA 1158 0.4585 MGKASKLTSSSGRSANAGSVTAASSQDWAAIKIQSAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQQMKKWQALLRAQARVCARRVHILQAPNSTSKSPSCHLHGPATPDKFESPIRSKSMKDEHSPLLKRNGSKSCLQQVHGSSGQEKCRNKSERHIDELTWNQEKSSMRTSSTTNGDKSDKNPEIDSRRSQATSSSRRRNLFSTTNNHVLVSDQHCISSKSYTTSNHNNNNKESSSVISLQSGPSPSCEVQSQSPMKPNWVEESPFCTAENSPQYLSASSKDNVPKRSPFGGSRSYICDYSDYPSYMACTESSKAKVRSLSAPKQRPNQCDRSSSSTRYSLNGLGCQRPNYALQGCFTNKGYPGSGRLDKLGMPVGYRF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01715 385 PANTHER CALMODULIN BINDING PROTEIN IQD22 20 380 - -
Adu01g01715 385 MobiDBLite consensus disorder prediction 152 168 - -
Adu01g01715 385 Pfam IQ calmodulin-binding motif 53 67 IPR000048 GO:0005515
Adu01g01715 385 Pfam IQ calmodulin-binding motif 28 47 IPR000048 GO:0005515
Adu01g01715 385 Gene3D - 23 79 - -
Adu01g01715 385 ProSiteProfiles IQ motif profile. 50 77 IPR000048 GO:0005515
Adu01g01715 385 MobiDBLite consensus disorder prediction 169 184 - -
Adu01g01715 385 MobiDBLite consensus disorder prediction 97 213 - -
Adu01g01715 385 MobiDBLite consensus disorder prediction 227 270 - -
Adu01g01715 385 MobiDBLite consensus disorder prediction 136 151 - -
Adu01g01715 385 ProSiteProfiles IQ motif profile. 26 54 IPR000048 GO:0005515
Adu01g01715 385 PANTHER IQ-DOMAIN 5-RELATED 20 380 - -
Adu01g01715 385 MobiDBLite consensus disorder prediction 119 134 - -
Adu01g01715 385 MobiDBLite consensus disorder prediction 185 199 - -
Adu01g01715 385 Pfam Protein of unknown function (DUF4005) 279 347 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01715 Adu-Chr1 58819643 58827314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01715 6 385 IQD Protein Family AT4G23060 38.902 8.39e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01715 - - adu:107490560 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01715 01 58819643 58827314 Adu05g00921 05 11783891 11786794 PCT