Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01706 ATGAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCTGGAGTTCCTCCGGAAGAAGCGGGTGCCGCGGTAGCTGCCGAATCTTCTACTGGTACATGGACAACTGTTTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTACAACATCGAGCCGGTTGCTGGCGAAGAAAATCAATATATTGCCTATGTAGCTTATCCTTTAGACCTTTTTGAGGAAGGTTCTGTTACTAACATGTTTACTTCCATTGGAACCATCATCAGCGAAATCTGCAAAATCAAGCAGCTGAGTGAGTTGTACATAACTGAGAACAAGCTAATTTCTGGAGAGGTTCCAACTTGCTTTGGTAATCTTACTTCTCTAAGAAAACTTTACTTGAACTCCAACAAACTCAGTAAGGTGCCTTCTTCTCTTTGGAGCCTCAGAGACATTCTTGAGGTGAACTTGTCTGACAATGCTTTAACTCTGTCTCTTCCAATTGAAATTGGGAACTTAAAGGCTGTGACTTTCTTGGATCTATCAAAGAATATGATCTCAGGAAGCATTCCTGGGGCCATTTCTGGATTGCAAAATTTGCAAATTCTCAACTTATCACAAAATAAATTGGTAGGGGGTATTCCTGATTCACTTGGCAGTTTGATAAGTTTGACAGATTTGGACTTATCTCAAAACAACTTGTTTGGCTTGATTCCAAGATCACTGGAGTCACTTCATTATCTTGAATTCATCAATCTTTCTCATAATAGTTTGGAAGGAGAGATTCCGAGTGGTGGACCTTTCAAAAATTTCACTGCTCAATCTTTCATGTTTAATAAAGCACTTTGTGGAAATGCCAGATTACAAGTCCCAGCATGCAGTAAAGTAAAGAAGAAAGGGTCAAATGCAAACATATTCTTCATCAAATGCATATTGCCTATAATGGTTTCAATCATTCTGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGATCAAAGAGCTTCAGTGTAGAATGCGAAGCAATGCGCAATCTGCGCCATCGAAATCTCATCAAGATCATAGATTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAGATGTGGCATCTGCATTGGACGACTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGTTACATTGCACCGGAGTTTGGATCCAAAGGGATTATCTCTACAAAGGGAGATGCATACAGTTTTGGGATAATGCTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGACTTGTTTGTTGCAGGATTAAGCATGAAAGGTTGGATTAGTGAATCATTGTCACATGCAATTGATCGAGTTGTGGATTCCAACTTGTTACAAGATGAAGGTCACCACCATGTTGATGACATAATAGCATCTACATCATCTATCTTGAAACTGGCCTTGAATTGTTGTGAGGATTTACCTGAAGAACGAATGAACATGAAAGATATTGCTGCATCACTGAACAAAGTTAAGGCCAAGTTTCTTAAAGCTAATGACAAGGATGTCGTTCGGTTTTGTAGAAAATGA 1674 0.3967 MKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYNIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIGTIISEICKIKQLSELYITENKLISGEVPTCFGNLTSLRKLYLNSNKLSKVPSSLWSLRDILEVNLSDNALTLSLPIEIGNLKAVTFLDLSKNMISGSIPGAISGLQNLQILNLSQNKLVGGIPDSLGSLISLTDLDLSQNNLFGLIPRSLESLHYLEFINLSHNSLEGEIPSGGPFKNFTAQSFMFNKALCGNARLQVPACSKVKKKGSNANIFFIKCILPIMVSIILATNGFDESNLLGSKSFSVECEAMRNLRHRNLIKIIDCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMIDVASALDDFGIAKLLGEGQSKEYTKTMATVGYIAPEFGSKGIISTKGDAYSFGIMLMETFTRKKPTDDLFVAGLSMKGWISESLSHAIDRVVDSNLLQDEGHHHVDDIIASTSSILKLALNCCEDLPEERMNMKDIAASLNKVKAKFLKANDKDVVRFCRK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01706 557 ProSiteProfiles Leucine-rich repeat profile. 127 148 IPR001611 GO:0005515
Adu01g01706 557 ProSiteProfiles Protein kinase domain profile. 275 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01706 557 SUPERFAMILY L domain-like 92 283 - -
Adu01g01706 557 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 91 320 - -
Adu01g01706 557 Pfam Protein kinase domain 393 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01706 557 Gene3D Transferase(Phosphotransferase) domain 1 403 541 - -
Adu01g01706 557 Pfam Leucine Rich Repeat 222 244 IPR001611 GO:0005515
Adu01g01706 557 Gene3D - 1 110 IPR036422 GO:0015977|GO:0016984
Adu01g01706 557 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 333 403 - -
Adu01g01706 557 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 403 547 - -
Adu01g01706 557 SUPERFAMILY Protein kinase-like (PK-like) 321 539 IPR011009 -
Adu01g01706 557 Gene3D Ribonuclease Inhibitor 150 290 IPR032675 -
Adu01g01706 557 Pfam Ribulose bisphosphate carboxylase large chain, N-terminal domain 2 93 IPR017443 GO:0015977|GO:0016984
Adu01g01706 557 SMART LRR_typ_2 196 219 IPR003591 -
Adu01g01706 557 SMART LRR_typ_2 220 243 IPR003591 -
Adu01g01706 557 SMART LRR_typ_2 172 195 IPR003591 -
Adu01g01706 557 SMART LRR_typ_2 125 148 IPR003591 -
Adu01g01706 557 Gene3D Transferase(Phosphotransferase) domain 1 314 402 - -
Adu01g01706 557 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 403 547 - -
Adu01g01706 557 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 333 403 - -
Adu01g01706 557 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Adu01g01706 557 Pfam Leucine rich repeat 171 209 IPR001611 GO:0005515
Adu01g01706 557 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 91 320 - -
Adu01g01706 557 SUPERFAMILY RuBisCO, large subunit, small (N-terminal) domain 2 90 IPR036422 GO:0015977|GO:0016984
Adu01g01706 557 PRINTS Leucine-rich repeat signature 175 188 - -
Adu01g01706 557 PRINTS Leucine-rich repeat signature 196 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01706 Adu-Chr1 58207444 58220689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01706 91 546 Receptor kinase-like Gene Family AT3G47570 30.263 5.26e-74 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Adu01g01706 Pkinase 1.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01706 - K13420 aip:107633486 692.96