Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01673 ATGGCCACTTTCACGTTTTCATTGTGCCCTCACACCCTCTGTTACCGCCCTTACACCACACGCTCTTCTTCCCTTTCTTGCTCTTTCCCCTCTTCTGCTCTCCCAGATAATGTTGGATCTGAAGTACCGAGAAAACGAATAAGAAGAATAGAAGGTCCAAGAAAGAGCATGGAAGACTCTGTTAAACGTAAGATGGAGCAATTTTATGAGGGATCCGATGGACCACCCATCCGTGTTCTTCCTATTGGTGGATTAGGTGAAATTGGAATGAATTGCATGCTTGTTGGTAACTATGACCGCTACATTCTCATTGATGCTGGTGTCATGTTTCCAGACTATGATGAGCTTGGGGTCCAAAAAATCATACCCGATACAACATTCATAAAAAAATGGAGCCACAAAATTGAGGCAGTTGTTATAACACATGGGCATGAAGATCATATCGGTGCGTTACCTTGGGTCATCCCAGCATTGGATTCTCATACGCCAATTTTTGCATCATCCTTCACAATGGAGCTTATTAAGAAACGCTTGAAGGAACATGGTATTTTTGTTCCATCCAGACTCAAAGTATTTAGAACAAGGAAGAAGTTTATGGCAGGGCCTTTTGAGATAGATCCAATCACGGTGACCCATTCTATTCCTGATTGCTGTGGTTTAGTACTTCGTTGTTCTGATGGGACTATTCTTCACACCGGGGACTGGAAGATTGATGAAACACCATTAGACGGTAAAGTTTTCGATCGTGAAGCTCTAGAGGAGCTCTCTAAAGAAGGAGTAACATTGATGATGAGCGATTCAACAAATGTACTCTCACCTGGAAGGACAACCAGTGAATCTGTCGTGGCAGATGCATTGTTGAGGCATATTTCAGCTGCTAAAGGAAGGGTTATTACGACTCAGTTTGCATCAAATATACATCGTCTGGGAAGCATCAAAGCTGCTGCTGATTTAACTGGTAGAAAGCTGGTATTTGTTGGCATGTCTTTAAGGACATACTTAGATGCAGCTTGGAAAGATGGAAAGGCTCGAATTGATCCATCCACTTTGATTAAAGCGGAGGATATTGATGCTTATGCTCCAAAGGATTTGCTAATTGTTACAACAGGCTCCCAAGCAGAACCTCGTGCGGCCTTGAATCTTGCGTCTTATGGAAGTAGTCATTCTTTCAAACTAACAAAGGAAGATGTTGTTTTGTATTCAGCTAAGGTTATCCCTGGCAATGAGTCCCGTGTTACAGACATGCTAAACCGCATATCAGAAATTGGATCAACAATAGTTATGGGGAAGAATGAATATCTGCACACGTCTGGTCATGGGTATCGCGGAGAATTGGAAGAAGTACTTAGAATTGTGAAACCACAGCATTTTCTTCCCATACATGGGGAACTCTTGTTCTTGAAAGAACATGAATTGCTTGGAAAGTCCACTGGCATTCGACACACCACTGTTGTTAAGAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGAAGAGTCCTTTCTAATGGCTTCATTTCACTTGGAACAGAAAATTTGCAGTTGAAGTATAGTGATGGTGACAAAGCATTTGGTACATCGAATGATCTCCTTATTGATGAAAGAATGAGAATTGCATTAGATGGCATCATTGTGGTTAGCATGGAAATATTCCGCCCTCAAAATCTAGATGATCAAGTTGGAAACACATTGAAAGGCAAGATAAGAATTACTACAAGATGCCTGTGGCTTGACCAAGGGAAGCTGATGGATGCACTTCATAAAGCTGCGAATGCTGCCCTTTCAAGCTGCCCTGTAAACTGTCCACTGGCTCACATGGAAAGAATTGTGTCTGAGGTGCTGAGGAAAATGGTGAGGAAGTATAGTGGAAAGCGGCCTGAAGTTATTGCCATTGCTGTAGAAAATCCTTCAGCTGTTATTGAAGATGAGGTAAAGACAAAGTTGTCTGGCAAAGCCCATGTGGATGGGATATCAACATGGAGAAGAGTGTTAGATGGGCATGGGAAGGAAAATAACTCCACTAAAATGCAAATTAGAGGTGTTGAAGGATTAGCATCTGAAGAATACACTACCACCTCAAGTGGAGATGATGATGATATTTCTGAAACAGAGGATCAAGATGAATTTTGGAAGTCATTCGTCGATTCATCGTCAGCTGAGAAGTCAATCAAAGCTAACAATGGTTATGTTCCTCAAAAGGAGAATAAGCCCCAACTGAAGAAAGATAGTTCTGAAGAGTCTGAAGAAGAAATGTCCGAAACATCAAATTTAGAATCCAAATATTCAAAATCTGCAAAGAGAAATAAATGGAAACCTGAGGAAATTAAGAAGCTGATTGATATGCGGGGTGAACTACATGATCGATTCCAAGTAGTAAAGGGGAGGATGGCCCTTTGGGAAGAAGTATCTCAGAACTTGTCGGCAAATGGGATCAGCAGAAGTCCTGGGCAGTGCAAATCTCTATGGACATCTTTGTTACAGAAATATGAGGAGGTCAAGAATGAGAAGAATACCAAGAAAAAGTGGTCATATCTTGAGGACATGGAGAGGATTCTATCTGAAAATGAGGAACTGGCAACAAAATGA 2589 0.4141 MATFTFSLCPHTLCYRPYTTRSSSLSCSFPSSALPDNVGSEVPRKRIRRIEGPRKSMEDSVKRKMEQFYEGSDGPPIRVLPIGGLGEIGMNCMLVGNYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIKKRLKEHGIFVPSRLKVFRTRKKFMAGPFEIDPITVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVADALLRHISAAKGRVITTQFASNIHRLGSIKAAADLTGRKLVFVGMSLRTYLDAAWKDGKARIDPSTLIKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSFKLTKEDVVLYSAKVIPGNESRVTDMLNRISEIGSTIVMGKNEYLHTSGHGYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVVKNGEMLGVSHLRNRRVLSNGFISLGTENLQLKYSDGDKAFGTSNDLLIDERMRIALDGIIVVSMEIFRPQNLDDQVGNTLKGKIRITTRCLWLDQGKLMDALHKAANAALSSCPVNCPLAHMERIVSEVLRKMVRKYSGKRPEVIAIAVENPSAVIEDEVKTKLSGKAHVDGISTWRRVLDGHGKENNSTKMQIRGVEGLASEEYTTTSSGDDDDISETEDQDEFWKSFVDSSSAEKSIKANNGYVPQKENKPQLKKDSSEESEEEMSETSNLESKYSKSAKRNKWKPEEIKKLIDMRGELHDRFQVVKGRMALWEEVSQNLSANGISRSPGQCKSLWTSLLQKYEEVKNEKNTKKKWSYLEDMERILSENEELATK 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01673 862 MobiDBLite consensus disorder prediction 736 767 - -
Adu01g01673 862 Gene3D - 278 428 IPR042173 -
Adu01g01673 862 SMART Lactamase_B_5a 89 286 IPR001279 -
Adu01g01673 862 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 430 475 IPR011108 -
Adu01g01673 862 CDD GT1 769 834 - -
Adu01g01673 862 MobiDBLite consensus disorder prediction 666 708 - -
Adu01g01673 862 ProSiteProfiles Myb-like domain profile. 763 827 IPR001005 -
Adu01g01673 862 Pfam Beta-lactamase superfamily domain 100 236 IPR001279 -
Adu01g01673 862 MobiDBLite consensus disorder prediction 723 767 - -
Adu01g01673 862 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 5 862 - -
Adu01g01673 862 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Adu01g01673 862 Gene3D - 771 832 - -
Adu01g01673 862 Gene3D - 81 493 IPR036866 -
Adu01g01673 862 Pfam Myb/SANT-like DNA-binding domain 768 852 IPR044822 -
Adu01g01673 862 PANTHER RIBONUCLEASE J 5 862 - -
Adu01g01673 862 CDD RNaseJ_MBL-fold 80 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01673 Adu-Chr1 55644914 55653407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01673 753 854 Trihelix Transcription Factor Family AT2G38250 29.808 1.13e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu01g01673 Lactamase_B_2 4e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01673 - - gmx:100814619 1421.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01673 01 55644914 55653407 Adu08g02823 08 44796519 44803446 PCT