Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01649 ATGTCTTCTAATTATCCAAATAGTTGCGGCTTCAAACGCGAGTTCAACAGCGATGAAATAAGCCCTATAATGGTGCAGGATCCTTCTTGCATAATCTTCTATTCCTGTCCCAACCTATCCGACTTGGATGATACTACTACTCCTTTCTATACAGTAAAAGACCGTTTTAGCCCCGAAGAGAAAAGAATCTTGGAGAATACTTTCATCCACTGGAGCCACACTATAAGCTCTTCTTTGGATGAAATTTCACAAACCAAAAGGCTGAGAAGAACCACAAGCATCCCAATTTCTCTAGAAAATCTCTCAATAAACCCGATTTATGGCTCGAATTATAATAAAAATAGCATCCAAACGCACATCAGAGATCACATAAAAAGTTGTTCGCAGATGTACCGCGCTGCCGAGGCAGTTGAAGAGGCAGCACAAGACATGATTAATTCGGAAGGCGGCGGAGAAGATGGCTGCGATGGAATGAGGCTTGTTCAACTGCTAATCTCTTGCGCCGAGGCCGTTGCGTGTCGTGACAAATCGCACGCTTCGATACTTCTATCAGAACTCAAGTCTAGCGCCTTGGTTTTCGGCACCGCCTTCCAGCGAGTAGCGTCCTGCTACGTGCAGGGCTTGTCCGAGCGATTGTCTTTGATTCAGCCGTGTTTTGGTCCGGTGGCGGTGGCGCAACCAATGATGAACATAATGGACGCCGCTTCGGAGAAGATGGAAGAAGCGTTCAGGCTGGTGTATGAAATCTGTCCACATATTCGATTCGGACATTTCGTGGCAAATTCCGCGATAGTGGAAGCCTTTGAGGGTGAGAGTCTTGTCCATGTGGTAGACCTCGGCATGAGTCTAGGCCTATCACATGGTCACCAATGGAGGGGCCTAATCCAATCCTTGGCCAACCGCTCCGGGGCCTGTGTTCGCAGGCTCCGGATCACCGCGGTTGGTCTCTGTATTGGCAGATTCCGGATCATTGGTGATGAACTCTCTGTTTACGCGAATAGCATGGGAATCAACTTTGAATTCTCCGTTGTGCAGAAGAATCTAGAGAATCTAAAACCTGAAGATGTCATAAAAGAAGATAATGAGGTTCTTGTGGTGAATAGTATCCTTCAGTTGCATTGTGTTGTTAAAGAAAGCCGTGGCGCTTTGAACTCTGTGCTTCAGATGATTCACGGGCTTTCGCCAAAGGTATTGGTTATGGTTGAGCAGGATTCGAGTCACAATGGACCGTTTTTTCTTGGAAGGTTTATGGAATCTTTGCATTACTACTCTGCAATATTTGATTCGCTTGATGCAATGTTGCCCAAGTATGATACGAAGAGAGCGAAGATGGAGCAGTTTTACTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAGGGGCCGCTTCGGATGGAGCGGCACGAGAGGGTGGACCAGTGGCGGAGGAGGATGAGCCGGGCGGGGTTCCAGGGTTCGCCGATTAAGATGGTGGCGCAGGCAAAGCAGTGGCTTGTGAAGAACAAGGTTTGTGATGGATATACTGTTGTGGAAGAGAAAGGGTGCTTGGTTCTTGGTTGGAAATCAAAGCCTATTGTTGCAGCTTCTTGTTGGAAGTGTTGA 1602 0.4719 MSSNYPNSCGFKREFNSDEISPIMVQDPSCIIFYSCPNLSDLDDTTTPFYTVKDRFSPEEKRILENTFIHWSHTISSSLDEISQTKRLRRTTSIPISLENLSINPIYGSNYNKNSIQTHIRDHIKSCSQMYRAAEAVEEAAQDMINSEGGGEDGCDGMRLVQLLISCAEAVACRDKSHASILLSELKSSALVFGTAFQRVASCYVQGLSERLSLIQPCFGPVAVAQPMMNIMDAASEKMEEAFRLVYEICPHIRFGHFVANSAIVEAFEGESLVHVVDLGMSLGLSHGHQWRGLIQSLANRSGACVRRLRITAVGLCIGRFRIIGDELSVYANSMGINFEFSVVQKNLENLKPEDVIKEDNEVLVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQGSPIKMVAQAKQWLVKNKVCDGYTVVEEKGCLVLGWKSKPIVAASCWKC 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01649 533 ProSiteProfiles GRAS family profile. 151 532 IPR005202 -
Adu01g01649 533 PANTHER DELLA PROTEIN RGL1-LIKE 110 532 - -
Adu01g01649 533 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 110 532 IPR005202 -
Adu01g01649 533 Pfam GRAS domain family 160 532 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01649 Adu-Chr1 52624314 52626135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01649 157 533 GRAS Transcription Factor Family AT1G66350 38.058 1.06e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu01g01649 GRAS 6.2e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01649 - - adu:107491113 1073.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01649 01 52624314 52626135 Adu01g01649 01 52624314 52626135 ECH