Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01645 ATGAAGAAGCTCACTGCAATTGTTTCCATTTTCGTGATCTTAACATTCTCTTTTCATGAAATTGCGTATGTTTCTTCATCTCCTCTCTTACACCACGCAAAACAGGTTCACGAAGAGAAATCTTCTACTGTAAGGGATCAGGAGGAGCATAAAATTTTCGTAGACAGGCATGATTGGCGGTGTGGATATTGTAGAAAAGTTTTCCGTGAAGAAAAATTTCTTGATCAGCATTTTGATAACAGGCACTCCAATCTTCTGAATGTAagtcatgataattgcttggctgatttatgtggagcattgcattgtgatgctgttatgaattccaagttctctagaactaagtgttatccagcagctgctgcaaaaaaccgtcacctatgtgagagtcttgctgacagttgcttttccataagccaggggccatcagcaagctgtcttcatgaattgtttatacaccagttttgtgatgctcacacctgctcagggaaacagaagcccttctctagaggaggcaaggagcaaagtagtttcttccgcctggctgctggagcattgatcttggtgctacttcctgtgttctatctttttctttatcttgttcaaagtgatatgaagggtcgaactcaggagcttcgtcgcatctcaaaagcaggatggaaagtcaaaccatcatga 678 0.1475 MKKLTAIVSIFVILTFSFHEIAYVSSSPLLHHAKQVHEEKSSTVRDQEEHKIFVDRHDWRCGYCRKVFREEKFLDQHFDNRHSNLLNVSHDNCLADLCGALHCDAVMNSKFSRTKCYPAAAAKNRHLCESLADSCFSISQGPSASCLHELFIHQFCDAHTCSGKQKPFSRGGKEQSSFFRLAAGALILVLLPVFYLFLYLVQSDMKGRTQELRRISKAGWKVKPS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01645 225 ProSitePatterns Zinc finger C2H2 type domain signature. 61 82 IPR013087 -
Adu01g01645 225 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 35 225 - -
Adu01g01645 225 PANTHER ZINC FINGER PROTEIN-RELATED 35 225 - -
Adu01g01645 225 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 84 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01645 Adu-Chr1 52167356 52171353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01645 45 225 C2H2 Transcription Factor Family AT5G63280 62.431 3.52e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01645 - - ccaj:109814494 322.013