Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01603 ATGGGTGGTGCAAGTGAAGACGAGAGTGTTTCAGAGACTGAGAGAGATGTTGAGTCCGTCGTCTTCGTTCACGTTCTTCGCCGTTCAAGTTTGGTCGGCGTTCACCGTTCGCGTTCGTCTGGAAGCCACGTTGCCCTGCTTCAAACTCTGCGACCAACCCGCGCGCTCCACCTAGCCGTTGAACTGCTCTCTTTTGTCGCCGCCATCCCCAACAACCGCCGCAAAATGACTCGCCAAGGAGCTTATAAAGAAACCCTTCCTAATGAGTTCAACCCCAGTTATCTAAAAATATATTACAATAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGAAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCGCCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAATATAAGATATGAAAGCTTGAATGCTTCTGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGATTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGACTAATGAGCAGAGAGCAGCAGTTGCGGACTATTTTCGTGTCTACAAGGAAAATGAAAATAACTATAAGAAGGTTTCCTTGATGGGTCAAGTTCTGCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAGGAATATTTTGAGACAAAACTGCTTACAAGTCAAAATTTACTTTCTAGCAAGGAGAGATATGAAAAGATCCTAGAGATGATTCCTGATCAATCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGTATTGAGGCACAAGGGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATATCCTAGGCTTGATATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAATAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACGACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTCCAGCCATTACTGAAAATTTGCAAGGAGGAATTGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGAATCTGCTTAGTTGGCTTCATCGGATAGGAGTTAGTATGGGATTGTATTTGGATGCTTCATCATATGGACTTATGAAAGGGAAGGGAGATTCTGGGTTTCAGGTCTATGTAATGTAA 1572 0.4307 MGGASEDESVSETERDVESVVFVHVLRRSSLVGVHRSRSSGSHVALLQTLRPTRALHLAVELLSFVAAIPNNRRKMTRQGAYKETLPNEFNPSYLKIYYNKLFPHADLYRWMSYGNDGKHPACDSSYLGRRKFSYTLDNDIFVRYNTFNSAAELENSIKDKCPLKIDIGPIYNLNIRYESLNASAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMIVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLTNEQRAAVADYFRVYKENENNYKKVSLMGQVLHPFLARSYTEVLKEYFETKLLTSQNLLSSKERYEKILEMIPDQSIASELRGKWQESRRIEAQGVRRCVEEIVFTYTYPRLDMEVSKHMNHLLKAPFCVHPKIGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGEWNKTSLANAIKLFRSSFLQPLLKICKEELESSYNAKLQQSKNLLSWLHRIGVSMGLYLDASSYGLMKGKGDSGFQVYVM 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01603 523 SUPERFAMILY Prim-pol domain 90 433 - -
Adu01g01603 523 PANTHER DNA PRIMASE 101 356 - -
Adu01g01603 523 PANTHER DNA PRIMASE 356 490 - -
Adu01g01603 523 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 96 431 IPR014052 GO:0003896|GO:0006269
Adu01g01603 523 Pfam DNA primase small subunit 199 410 IPR002755 GO:0003896|GO:0006269
Adu01g01603 523 PANTHER DNA PRIMASE SMALL SUBUNIT 101 356 IPR014052 GO:0003896|GO:0006269
Adu01g01603 523 PANTHER DNA PRIMASE SMALL SUBUNIT 356 490 IPR014052 GO:0003896|GO:0006269
Adu01g01603 523 CDD AE_Prim_S 104 419 IPR014052 GO:0003896|GO:0006269
Adu01g01603 523 Gene3D DNA primase, PRIM domain 80 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01603 Adu-Chr1 49632150 49640468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01603 83 490 Core DNA Replication Machinery Family AT5G41880 60.970 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01603 K02684 - tcc:18606689 658.292