Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01597 ATGAACAAACTCAGACAGTCATCATTTGACGAGTACATATCCACGTGTTCCTCTTCGGAAGCGAGCTCATCCAACAATAACAAGTCATCGCCGCCAAATGCCTCCATCGACTACGACGAAGCGATAACGTTGGCGTCATCGAGGCCGAAGAAGCGTGCGGGGAGAAGAATCTTCAAGGAAACGAGGCACCCGGTGTACCGAGGAGTGCGTAGGAGGAACAACAACAGGTGGGTCTGCGAGCTTCGCGTTCCAAACACCAAGTCCAAACGGATATGGCTCGGGACCTACGCCACACCTGAGATGGCGGCGCGTGCCCACGACGTCGCCGCACTCGCGCTTCGCGGGAAGTCAGCCTGCCTCAACTTCGCAGACTCCGCCTGGCGACTACTCCCTTTGCTCCCGGCGCCTACTGATGGCGCCGAAGAGATAAGGAGAATGGCCGCCGAGGCTGTGAAGACAGTTACAGTTGAGGACGGTTATAGTAATAACCGACGTCCAGTAAGTACGGGCAGTGCGGTTACTGAGTACGAGGTTTGCAGCGGTGAGAGCGGGGTGGAAGAAGATGTAAAGAAGGATTTGATTGTTGATACTAACAATGATGATTATTACATGCATGATTGGGTTCGGAGCATGACGGAGGAGCCGTTACGATCTCCGCCTCCATTTTTCAGATACGATTTTGGCAGTAGCAGTAGTCATAGGGAATGGAATGATATGGAGGTTGATGCCGAGGTGTCACTGTGGAGCTTTTCCATTTGA 759 0.5296 MNKLRQSSFDEYISTCSSSEASSSNNNKSSPPNASIDYDEAITLASSRPKKRAGRRIFKETRHPVYRGVRRRNNNRWVCELRVPNTKSKRIWLGTYATPEMAARAHDVAALALRGKSACLNFADSAWRLLPLLPAPTDGAEEIRRMAAEAVKTVTVEDGYSNNRRPVSTGSAVTEYEVCSGESGVEEDVKKDLIVDTNNDDYYMHDWVRSMTEEPLRSPPPFFRYDFGSSSSHREWNDMEVDAEVSLWSFSI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01597 252 SUPERFAMILY DNA-binding domain 65 125 IPR016177 GO:0003677
Adu01g01597 252 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 4 252 IPR045277 GO:0003700
Adu01g01597 252 CDD AP2 66 125 IPR001471 GO:0003700|GO:0006355
Adu01g01597 252 Gene3D AP2/ERF domain 65 124 IPR036955 GO:0003700|GO:0006355
Adu01g01597 252 MobiDBLite consensus disorder prediction 15 35 - -
Adu01g01597 252 ProSiteProfiles AP2/ERF domain profile. 65 123 IPR001471 GO:0003700|GO:0006355
Adu01g01597 252 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 4 252 - -
Adu01g01597 252 Pfam AP2 domain 64 115 IPR001471 GO:0003700|GO:0006355
Adu01g01597 252 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Adu01g01597 252 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Adu01g01597 252 SMART rav1_2 65 129 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01597 Adu-Chr1 49182291 49183444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01597 42 250 AP2-EREBP Transcription Factor Family AT1G12610 46.364 2.65e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu01g01597 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01597 - - pvu:PHAVU_003G212800g 220.32