Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01549 ATGGAGTCAAGCGCCGGCGGCATCAGCGGCGGCGTTACGGTGGTCGGATCAGATGCTCCGTCGGAGTATCAAATAGCTCCGAGGACAGAGAACCCTTCTCCAGCAGGAGGATCGGCCGCGCCAATCCCTGCGCCAGCTCCGACGAACCAAGGCGGTGCTCTGCCGCATCCTCCGCCACATATGGCGAAGATGACATCGCCTCCGGCAACAGCGCCGGGGAAGAAGAAGAGAGGGCGGCCCAGAAAGTATGGCCCAGACGGGTCAGTGGTGGCGCTGTCCCCAAAGCCAATATCGTCTTCGGCACCGCTGGCGTTGCCGCCGGTGATCGATTTCTCGGCGGAGACGAAGCGCGGGAAGGTGAAGGCAGCTGGTACCGTGAGCAGAGCCAAGTTTGAGGTTGAGAATTTAGGTGAATGGGTTGCATGCTCGGTTGGTGCTAATTTCACACCCCATTTCATCACTGTTAATCCTGGGGAGGATGTTACTATGAAGGTAATATCATTTTCTCAGCAAGGCCCACGAGCTATATGCATTTTGTCAGCAAATGGAGTCATATCAAGTGTTACACTTCGTCAGCCTGATTCTTCTGGTGGCACATTGACGTATGAGGGACGTTTTGAAATTCTATCTCTAAGCGGCTCGTTCACACCAAGTGAAACTGCAGGAACACGAAGCAGATCGGGTGGCATGAGTGTCTCTTTAGCAGGTCCAGATGGACGAGTTATAGGTGGTGGAGTCGCTGGTCTATTGGTGGCTGCAAGTCCCGTGCAGGTAGTGGTTGGAAGTTTTCTAGCAGGGAACCAACATGAGCAAAAGCCAAGAAAACCAAAACCTAATATTATAGCATCAACTGTGATGCCGGCTGCGAGTGTTCCTGTGTCAACGGCCGATCCAGTTGCTGTTCTGCAATCGCAGGCTTCCTTCCGAGGAGATAGTTGGTCTGCTGTTCCTGCAGATGTGAATAAGAACAAGCCGGCTGACATTAATGTGTCGCTTCCTGGAGGGTAA 1008 0.5347 MESSAGGISGGVTVVGSDAPSEYQIAPRTENPSPAGGSAAPIPAPAPTNQGGALPHPPPHMAKMTSPPATAPGKKKRGRPRKYGPDGSVVALSPKPISSSAPLALPPVIDFSAETKRGKVKAAGTVSRAKFEVENLGEWVACSVGANFTPHFITVNPGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFTPSETAGTRSRSGGMSVSLAGPDGRVIGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPRKPKPNIIASTVMPAASVPVSTADPVAVLQSQASFRGDSWSAVPADVNKNKPADINVSLPGG 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01549 335 CDD DUF296 149 263 IPR005175 -
Adu01g01549 335 MobiDBLite consensus disorder prediction 1 94 - -
Adu01g01549 335 ProSiteProfiles PPC domain profile profile. 145 288 IPR005175 -
Adu01g01549 335 MobiDBLite consensus disorder prediction 48 65 - -
Adu01g01549 335 Gene3D - 150 278 - -
Adu01g01549 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 147 266 - -
Adu01g01549 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 333 IPR039605 GO:0003680
Adu01g01549 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 10 333 - -
Adu01g01549 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 150 263 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01549 Adu-Chr1 45162033 45167603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01549 4 332 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.621 1.26e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01549 - - gmx:100801730 430.254