Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01536 ATGGGAATATATGAGAAGGTTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGAAATGGCTAAAAGTGGGACAGGCAAAAAAGCTGCATTTTGCATTCCTACATTGGAAAAAATTGACCAGGATAATAATGTTATTCAAGGTCGGTCGCTCAGGGTGGTTTGGGCATATTGGTTTAGCAGTTAA 219 0.3927 MGIYEKVFERPSPIQEESIPIALTGSDILEMAKSGTGKKAAFCIPTLEKIDQDNNVIQGRSLRVVWAYWFSS 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01536 72 Pfam DEAD/DEAH box helicase 13 53 IPR011545 GO:0003676|GO:0005524
Adu01g01536 72 Gene3D - 1 67 IPR027417 -
Adu01g01536 72 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 58 - -
Adu01g01536 72 PANTHER ATP-DEPENDENT RNA HELICASE DEAD-BOX, CONSERVED SITE-RELATED 1 58 - -
Adu01g01536 72 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 56 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01536 Adu-Chr1 44510040 44510894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01536 2 51 Eukaryotic Initiation Factors Gene Family AT3G13920 46.000 1.03e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01536 K12614 - ghi:121222337 108.227