Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01497 ATGCGGCCATTGCACCAATCTGCTGCCGGTGAACATGCGAGGCCTTCTTCTTCCATCGCCCAATCAATTCCATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCCCCAACTCATAACCTTCTGGAGGAGATTCCGAATCCATCCCCAAATTTCTTCATGAACCAGACAAACACACCAAATGAATTCTCCATGCCTACTAGGACTGTTGTTGATGAGCTTCCACGCCCACCTATCATAAACAGACCTCCTGAGAAGAGACAGAGAGTCCCATCCGCTTACAACCGCTTCATTAAGGACGAGATCCAACGCATTAAGTCTGTCAATCCTGATATAACCCACAGAGAGGCCTTCAGTGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATTCACTTTGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAACGTGCGCCAGCAGGAAGGAGAAGAGGTTCTGATGAAAGATGCTGGGTTTTATGCTTCGGCTAATGTTGGTGTTTCACCCTACTGA 531 0.4463 MRPLHQSAAGEHARPSSSIAQSIPFXXXXXXXXXXXXXFSPTHNLLEEIPNPSPNFFMNQTNTPNEFSMPTRTVVDELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVRQQEGEEVLMKDAGFYASANVGVSPY 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01497 176 MobiDBLite consensus disorder prediction 1 24 - -
Adu01g01497 176 SUPERFAMILY HMG-box 83 132 IPR036910 -
Adu01g01497 176 PANTHER PROTEIN YABBY 4 34 174 - -
Adu01g01497 176 MobiDBLite consensus disorder prediction 46 69 - -
Adu01g01497 176 MobiDBLite consensus disorder prediction 43 69 - -
Adu01g01497 176 Gene3D High mobility group box domain 84 158 IPR036910 -
Adu01g01497 176 Pfam YABBY protein 73 139 IPR006780 GO:0007275
Adu01g01497 176 PANTHER PROTEIN YABBY 6-RELATED 34 174 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01497 Adu-Chr1 41868140 41871788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01497 77 176 C2C2-YABBY Transcription Factor Family AT2G45190 75.728 5.74e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Adu01g01497 YABBY 1.3e-38 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01497 K25796 - gmx:100798441 255.373