Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01495 ATGTGCTTCGATCCTCTGCTCCTCTTCTCGTTGAGCTTCGATTCCCTGGTCGTTGAGATTTCCATCATCTACTCGTTGAGCTTCAATCTCTGCTTCTTTTTTCGTCAAGCTTCAATCCTCTACTCGTGTTCATCACCGCTAGTCAATGTTCGATTATCACTGCTCGCATTTTTGGTGAGATTCTCATTTTTGGCATTCTTCAGGAGTGTGATAAATGGTGGTGAGAGCAGCAATAAGAATGATCAAGTTCCAAAGGTAGTGAATTTTCTTAGTGTGAGGAAGGCAGAGGAAGATTCATCATCATCATCAGATCTTGTTGCCCTCACTACACACCTCTTCACCGGTAACAGTCTCTTGTCGTTACAGCAAAACAACAACTATGAGGTGGAGGAGCAGCAGTTTCAAACAAATAATAATCTGCAAGCACTCACATTGTCCATGGGAAGTGGTAGTAATAATAATAATAATAATAATAATAAGGATTCATCAACAACCAGCTGTGACAATAATAGCATTATTGAAGCCCCACCTTCTAATAGAAGAACTCTAGATACCTTTGGCCAGAGAACTTTAATATACCATGACATAGATGGACTGGAAGATATGAAGCTCATCTTTGGGATAATAGCTGCAGAAGGGAAGGACAATCAAGAAAAGGTAGTGTATTTGGGTGGATATAATAAAGAAGATAAAGTAGCTAGGGCTTATGATTTGGCTGCATTGAAGTATTGGGGGACATCCACTACTACCAACTTTCTTGTAATTTACTCTATACAAGAATCTGTAACCACCATAAGAAGGAAAAGTAGTGGTTTCTCGAGAGGTGCATCAATGTATCGTGGAGTTACACGGCATCACCAACATGGGAGATGGCAAGCAAGAATTGGAAGGGTCACCGGAAACAAAGATCTTTACTTAGGAACATTTAGTACGGAAGAAGAGGCTGCAGAAGCTTATGACATAGCAGCCATCAAGTTCAAAGGCCTTAAGGCCGTTACAAACTTCGACATGAGCCGTTACGACAACAAAGCCATTCTTGAAAGCAATGCTCTCCCAATTGGAGGTGGTGCTGCTAAGAGATTGAAAGAAAACAGTTGCTTGCACTCGGAGCTGatttag 1119 0.4111 MCFDPLLLFSLSFDSLVVEISIIYSLSFNLCFFFRQASILYSCSSPLVNVRLSLLAFLVRFSFLAFFRSVINGGESSNKNDQVPKVVNFLSVRKAEEDSSSSSDLVALTTHLFTGNSLLSLQQNNNYEVEEQQFQTNNNLQALTLSMGSGSNNNNNNNNKDSSTTSCDNNSIIEAPPSNRRTLDTFGQRTLIYHDIDGLEDMKLIFGIIAAEGKDNQEKVVYLGGYNKEDKVARAYDLAALKYWGTSTTTNFLVIYSIQESVTTIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVTGNKDLYLGTFSTEEEAAEAYDIAAIKFKGLKAVTNFDMSRYDNKAILESNALPIGGGAAKRLKENSCLHSELI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01495 372 SUPERFAMILY DNA-binding domain 217 253 IPR016177 GO:0003677
Adu01g01495 372 MobiDBLite consensus disorder prediction 146 178 - -
Adu01g01495 372 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 62 369 - -
Adu01g01495 372 SMART rav1_2 278 342 IPR001471 GO:0003700|GO:0006355
Adu01g01495 372 SMART rav1_2 207 259 IPR001471 GO:0003700|GO:0006355
Adu01g01495 372 ProSiteProfiles AP2/ERF domain profile. 278 336 IPR001471 GO:0003700|GO:0006355
Adu01g01495 372 SUPERFAMILY DNA-binding domain 277 338 IPR016177 GO:0003677
Adu01g01495 372 ProSiteProfiles AP2/ERF domain profile. 195 253 IPR001471 GO:0003700|GO:0006355
Adu01g01495 372 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 62 369 - -
Adu01g01495 372 Gene3D AP2/ERF domain 207 254 IPR036955 GO:0003700|GO:0006355
Adu01g01495 372 Gene3D AP2/ERF domain 278 338 IPR036955 GO:0003700|GO:0006355
Adu01g01495 372 CDD AP2 277 338 IPR001471 GO:0003700|GO:0006355
Adu01g01495 372 Pfam AP2 domain 279 328 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01495 Adu-Chr1 41312754 41315404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01495 83 369 AP2-EREBP Transcription Factor Family AT1G51190 54.878 1.34e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu01g01495 AP2 3.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01495 K09285 - tcc:18589779 306.605