Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01494 ATGAAGAATCAGAAATCTCCCAAATACGATTTTCCATCTAAGATCTTATGTCGTGTCATTGATGTTAAGTGTGTGGATATGACAATGAAAAATCCTACTCAGGAGTTGGTAGCAAAAGATATTCATGGGGTTGAATGGAAGTTTAAGTATATATACAGAGGGCATCCGAAGAGTTACTTGCTTTCAATTGGCTGGAGTGCATTCGTAGGCCAAGAAAGAAATAAAGTTGTGGTTCAAGTAACATTAAAAGAGTGA 255 0.3647 MKNQKSPKYDFPSKILCRVIDVKCVDMTMKNPTQELVAKDIHGVEWKFKYIYRGHPKSYLLSIGWSAFVGQERNKVVVQVTLKE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01494 84 Gene3D - 8 82 IPR015300 -
Adu01g01494 84 PANTHER AUXIN RESPONSE FACTOR 11 25 72 - -
Adu01g01494 84 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 25 72 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu01g01494 84 Pfam B3 DNA binding domain 21 73 IPR003340 GO:0003677
Adu01g01494 84 SUPERFAMILY DNA-binding pseudobarrel domain 18 69 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01494 Adu-Chr1 41310629 41311532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01494 25 73 B3 DNA Binding Superfamily AT4G23980 59.184 3.81e-18 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu01g01494 B3 4.7e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01494 K14486 - csin:114284626 75.8701