Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01490 ATGCCACTACGATCAGAGAAGAAAGAAGAAAAGAAAGAAAGAAGGAAAGAAAGAAATAAAGAAAGGAAAAGGAGGAAGGGGGCCGCGGGAAGAAGGAGAGGGTGGAGAAGGGAAGGCGGCGCGGTGGTTGTGGGAACCCTATTTACTCATCATCAGAAATGTGTGCTTGTTGACACACAAGGTGCAGGGAATAATCGAAAAATATCTGCTTTTATTGGTGGTTTGGATCTCTGTGATGGCAGATATGACACACATCAGCATAGGCTATTTTGCAATTTAGAAATCGTTTACAAAGAGGATTTTCATAATCCTACATTTCAAGTAGGTTCTAGTGGAGGTGGACCAAGAGAGCCATGGCATGGCATGATTTGCAAGGTTAAAGGGCTAGCAGCTTATGATATATTAATCAATTTCGAACAAAGATGGAGAAAAGTAAAAAAATGGCGAGACTTTAGACTCAACAAGGTCAAAAATTGGCACGACAATGCATTACTAAGGCTAGACCAGATATCATGGATAGTCAGTCCATCTTCGAGTTTTGGTGATGATAAAACTATCCAGGTGACCGACGAAAATGATCCTGAAACTTGGAATGTGCAGGTATTTTGGTCCATAGATTCAGGATCAGTGAAGGGTTTTCCAAAGATTTCGACAAGGCTCAATCTCAGGGAGAGAAAAAGAATCAAATGCTTTGATCACGATTACAACTCCTTAGGGAAGGTAGACAAGTCTCCTCTGGTGCTTTGCAAGCTATTGAGAAGGACTAGGAGATCAACCCCCAAGTCCGAGCACGTCGGTGTGTCGTGCGTAGGGGCAACGCGATGTGCTCGTCCCAGCACTTGGAGGGGGCACATCGCAGAAGGTGATTACCGGTTCGTGTTCACTCCCATGGAGCATCGCGTCGTGCTCGGCCTAGCTCTAAGCTCGACTTATGACGGGTCTCGACGAGCGTTGGCTCGGCCCTCCCGTATGCTTCCACTTGCCTGCACACGCCTTGGAGTGCGGGTCGCGGATCGTCTAGGCATCCTGGGTTTGCGAACCGTGTTGGCGGATGAGCAGTGTGTGGGTCCTAAGTGCTGTCTGGCTGCTTGCCTCGCACAACGAACGGGCGCACCGGACCCTCTTCATGTGTGGGCTTGA 1140 0.4798 MPLRSEKKEEKKERRKERNKERKRRKGAAGRRRGWRREGGAVVVGTLFTHHQKCVLVDTQGAGNNRKISAFIGGLDLCDGRYDTHQHRLFCNLEIVYKEDFHNPTFQVGSSGGGPREPWHGMICKVKGLAAYDILINFEQRWRKVKKWRDFRLNKVKNWHDNALLRLDQISWIVSPSSSFGDDKTIQVTDENDPETWNVQVFWSIDSGSVKGFPKISTRLNLRERKRIKCFDHDYNSLGKVDKSPLVLCKLLRRTRRSTPKSEHVGVSCVGATRCARPSTWRGHIAEGDYRFVFTPMEHRVVLGLALSSTYDGSRRALARPSRMLPLACTRLGVRVADRLGILGLRTVLADEQCVGPKCCLAACLAQRTGAPDPLHVWA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01490 379 Pfam Phospholipase D Active site motif 47 81 IPR001736 GO:0003824
Adu01g01490 379 Gene3D Endonuclease Chain A 5 166 - -
Adu01g01490 379 PANTHER PHOSPHOLIPASE D 42 218 IPR015679 -
Adu01g01490 379 MobiDBLite consensus disorder prediction 1 36 - -
Adu01g01490 379 PANTHER PHOSPHOLIPASE D 42 218 - -
Adu01g01490 379 SUPERFAMILY Phospholipase D/nuclease 45 150 - -
Adu01g01490 379 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 46 81 IPR001736 GO:0003824
Adu01g01490 379 MobiDBLite consensus disorder prediction 17 32 - -
Adu01g01490 379 MobiDBLite consensus disorder prediction 1 16 - -
Adu01g01490 379 Coils Coil 3 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01490 Adu-Chr1 41266974 41274070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01490 43 215 Phospholipase D Gene Family (Wang group) AT4G35790 60.326 8.28e-73 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01490 K01115 - ahf:112720191 388.267