Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01476 ATGGGAAGAAAAGCTGCTACTACTTGTTCCTCTTCCTCTAACATTTCTTCAAATGCTTCCTTGAATCTGAGACTTGCACTCAGCACTCACGAAGAACGTGGTGGAAGCCTGTTTGCGAAGGTGTACATGGAAGGCATTCCAATAGGGAGGAAACTCAACATATTAGCACATGGAAGCTACCATGAGCTTGTTAAGAGACTTGAGAACATGTTCGACACCACCATTCTCTGGGGTACAGAGATGGATGAAGTTGTAGTTCAACCTGGTGAGAGATGCCATGTATTCACTTATGAAGATGACGGAGGAGATCTTGTTATGATTGGGGATGTTCCTTGGGAGTAA 342 0.4415 MGRKAATTCSSSSNISSNASLNLRLALSTHEERGGSLFAKVYMEGIPIGRKLNILAHGSYHELVKRLENMFDTTILWGTEMDEVVVQPGERCHVFTYEDDGGDLVMIGDVPWE 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01476 113 Gene3D - 30 113 - -
Adu01g01476 113 Pfam AUX/IAA family 31 113 IPR033389 -
Adu01g01476 113 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 35 113 IPR003311 GO:0005634|GO:0006355
Adu01g01476 113 SUPERFAMILY CAD & PB1 domains 31 113 - -
Adu01g01476 113 PANTHER AUXIN-INDUCED PROTEIN 35 113 - -
Adu01g01476 113 ProSiteProfiles PB1 domain profile. 36 113 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01476 Adu-Chr1 39992245 39992586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01476 40 112 B3 DNA Binding Superfamily AT1G59750 36.000 7.13e-09 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Adu01g01476 AUX_IAA 2.4e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01476 K14484 - gmx:100781660 127.872