Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01456 ATGACTACCATGGCTATAGTTGCTGAGAGACTCGTGACAAAGTCATCATTGTCAAGTGATGAGACACCAATAGCTGTGGAGCTAGGGCTTTGTCATGACGGTGACTTTTCTTTAGTATGTCGGGAAAACTGTTCCGGGATTACGTCTCCAAAGCTGTATTTCCCCATTCAAACTCTGTTTCAAACTCCATTCACAAATGAAACACGAGCTTCTTCCTCTCTTCGTCGCACGAGCTACTTCTTCTCTTCGTGGCTGCTACTTCTGCTTCTTCCGCCGCTGCCATTGCCGCTGCCGCCGCCGCTTGCGTCGCACAATCTCTCTCTGTCATACCTTGCATTGCACGAGATTCCTCCGCCGCCGCTCTCGTCGCGTCTACTCCCATCGTCGCAGAGAGATCTTTGCCGTCGCTCTCATCGCATCTGCTCCCTCTGGCGCCTCTTCCATCTAATCTCAACTCACTCTCTCAATTCTTCTTATAACCATCTCAAATTTCAGAAAGATAGGCACAACAAGATTCACACATCTCAGGAGTTGAGGGACAGAAGGGTGAGGCTTTCAAGCGAAATATCGCGCAAGTTCTTTGATCTTCAGGACATGCTGGAGTTCAACAAGCCCAGCAACACGCTCGAATGGCTTTTCACCAAAAAGACTGCGGTTGTGGTTACTGCACTGCTAAAAAATGGTGCTACTTGTGTTGGCAAAACCGTTATGGATGAATTGTCTTTTAGAATTTTTGGTGAGAACAACCATTATGGAACTCCAATGAATCCTCAAATGCCATCTTGTATCCCTGGAGGGTCTTCTAGTGGTTCAGCGGGGCTTGGACAGAATGGTAAATTAACTAAACTTGATCTTTCAACCAAAAAGCTCACAGGACTAGTTCCAAAGTCTCTTTGTTTTGCTAAGAAGCTCAACATTCTGATTTTGCTCAACAACTTTCTCTTTGGATCTTTGCCTAATGATCTTGGTGAATGCTACACTCTTGAGAGAGTTAGATTGGAACATAACTACTTAACAGGACAGTTGAATCTTTCTAATAATCGTTTATCCGGGACCCTGCCGGCTTCAATCGAAAAGTTTCCTGATTTGGAAATCCTTCTTCTTCATGGAAACAGATTCTCAAGTGAAATTCCACCAGATATAGGAAAGTTAAAGAGTGTTCTCAAGATAGATTTGAGTGTTAACAACTTTTTAGGTACTATTTCTCCTGAGATTGGTAAACTTTCATTGCTAACATACTTAGATTTGAGCCAAAACCAATTATTTGGTCCAATACCAGTTTAG 1284 0.4354 MTTMAIVAERLVTKSSLSSDETPIAVELGLCHDGDFSLVCRENCSGITSPKLYFPIQTLFQTPFTNETRASSSLRRTSYFFSSWLLLLLLPPLPLPLPPPLASHNLSLSYLALHEIPPPPLSSRLLPSSQRDLCRRSHRICSLWRLFHLISTHSLNSSYNHLKFQKDRHNKIHTSQELRDRRVRLSSEISRKFFDLQDMLEFNKPSNTLEWLFTKKTAVVVTALLKNGATCVGKTVMDELSFRIFGENNHYGTPMNPQMPSCIPGGSSSGSAGLGQNGKLTKLDLSTKKLTGLVPKSLCFAKKLNILILLNNFLFGSLPNDLGECYTLERVRLEHNYLTGQLNLSNNRLSGTLPASIEKFPDLEILLLHGNRFSSEIPPDIGKLKSVLKIDLSVNNFLGTISPEIGKLSLLTYLDLSQNQLFGPIPV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01456 427 Gene3D Ribonuclease Inhibitor 277 342 IPR032675 -
Adu01g01456 427 Gene3D Amidase signature (AS) domain 199 274 IPR036928 -
Adu01g01456 427 Pfam TCP family transcription factor 165 225 IPR017887 -
Adu01g01456 427 SUPERFAMILY L domain-like 270 426 - -
Adu01g01456 427 Pfam Amidase 214 272 IPR023631 -
Adu01g01456 427 Gene3D Ribonuclease Inhibitor 343 427 IPR032675 -
Adu01g01456 427 ProSiteProfiles TCP domain profile. 165 223 IPR017887 -
Adu01g01456 427 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 272 342 - -
Adu01g01456 427 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 340 427 - -
Adu01g01456 427 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 272 342 - -
Adu01g01456 427 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 340 427 - -
Adu01g01456 427 SUPERFAMILY Amidase signature (AS) enzymes 213 273 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01456 Adu-Chr1 37753810 37758606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01456 274 427 Receptor kinase-like Gene Family AT5G65700 33.533 2.71e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu01g01456 Amidase 1.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01456 - - gmx:100777902 216.083