Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01401 ATGGATTCTCACCGTGACATAGAGGGCACCCAAGCTGATCATTCTGAAAGCAACAACAACATTTTCATTCAACAGGTGACTCACATGAATCAAAATACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGTTACTTCAGAACAACAAAATCTAGTTTCTGTTCTTGATCTGCAATTTTACAGTGAAGACCGACCTTCTCCAATTAAAAAGAATACAGAAACCTCAAAAGATTTAGATGAAGCTTTAGCCACTCCTAATAACATAGGGCATGCATTGAACCTTCCTCTTTCATTCAATAACACAAAGGCCAACTTCAGCAATGGAACCAGTGATGATGACCTTCAAACTCAGAATTTGGATCAAGTTCTTTGGCAAAATGACGATAATAGCGAGAAATTAACCATTTGTAGAGAGAAAAAAGATTTTGACCGTAAATACAAAGCAGAAGTATTGCTCACATCAAGGCTGCTCAGTAGCCCCAGCTTAATCCAGGCAGTTAATTCACCAGGTCACCTGATAAACCCCAAGTTGTTCTTTGCACTTGAACTATTGAAGACAAACAAGCTGCAGTTCAATATGAAGCACAATGCTGGGAAGATTCTTAGGATAAATAATCTTGAAGAAATGCAAAGAAAACTAATATTTGATGTTGTCAATGAGATTCTAGTACAAAAAATTAGTGTCTTAATATATGTATATTTTGGCTAA 723 0.3679 MDSHRDIEGTQADHSESNNNIFIQQVTHMNQNTATKELSKESAMAMITVTSEQQNLVSVLDLQFYSEDRPSPIKKNTETSKDLDEALATPNNIGHALNLPLSFNNTKANFSNGTSDDDLQTQNLDQVLWQNDDNSEKLTICREKKDFDRKYKAEVLLTSRLLSSPSLIQAVNSPGHLINPKLFFALELLKTNKLQFNMKHNAGKILRINNLEEMQRKLIFDVVNEILVQKISVLIYVYFG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01401 240 Pfam Domain of unknown function (DUF4378) 150 232 IPR025486 -
Adu01g01401 240 PANTHER LONGIFOLIA PROTEIN 6 233 IPR033334 GO:0051513
Adu01g01401 240 PANTHER LONGIFOLIA PROTEIN 6 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01401 Adu-Chr1 35499750 35500651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01401 1 233 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.880 5.27e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01401 - - adu:107484478 432.18