Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01399 ATGGACATGGAAGAAACTGTCCCTTTAGAGAGCGAAACACAACCAACTACGTCCTTCTCTTTCCCCATTATACCCTCCACGTCCTCCTCTTCCTCCTCCTCCAAGAAGAAGAAGAAGGTAGTTTTGAAGAGGAGCAATGATGGGAGGCACCCAACTTATAGAGGAGTACGAATGCGCCAATGGGGAAAGTGGGTATCCGAAATTCGGGAGCCTAGGAAGAAATCTAGGATTTGGCTTGGAACTTTTCCCACGGCAGAGATGGCGGCTCGAGCTCATGATGTGGCGGCTCTAACAATCAAGGGCAGCTCAACTTACCTCAATTTTCCTGAGCTAATAGCCGAATTGCCTCGTCCGGCTAGCAATTGCCCTAAAGACATTCAAGCAGCCGCAGCCAAAGCGGCCGTCATGAATTATCACCATGAAAGCCATGACATAGAATTAGAAGCCGAGTCCGAACTAAGCCAAGTCGAGTCTTCTTCAAGTCAAACTCAAATATCATCAAGTTCTACTTCATCATTATCGAAGGGTGAGGATGACATGTTCATGAATCTCCCTGATCTATCATCAGACTTGAATCATAGTTCTGATGAGTTTCATTACCTCTCGGCTTGGGTCATAGCTGGAGCCGAAGCCGAACATCTAGACTCAGATTTCCGGCTTGAAGAACCGTTCTTATGGTAG 681 0.4699 MDMEETVPLESETQPTTSFSFPIIPSTSSSSSSSKKKKKVVLKRSNDGRHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALTIKGSSTYLNFPELIAELPRPASNCPKDIQAAAAKAAVMNYHHESHDIELEAESELSQVESSSSQTQISSSSTSSLSKGEDDMFMNLPDLSSDLNHSSDEFHYLSAWVIAGAEAEHLDSDFRLEEPFLW 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01399 226 SMART rav1_2 52 115 IPR001471 GO:0003700|GO:0006355
Adu01g01399 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 27 226 - -
Adu01g01399 226 SUPERFAMILY DNA-binding domain 52 110 IPR016177 GO:0003677
Adu01g01399 226 Pfam AP2 domain 51 101 IPR001471 GO:0003700|GO:0006355
Adu01g01399 226 MobiDBLite consensus disorder prediction 1 53 - -
Adu01g01399 226 Gene3D AP2/ERF domain 52 110 IPR036955 GO:0003700|GO:0006355
Adu01g01399 226 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Adu01g01399 226 PRINTS Ethylene responsive element binding protein signature 75 91 IPR001471 GO:0003700|GO:0006355
Adu01g01399 226 MobiDBLite consensus disorder prediction 9 35 - -
Adu01g01399 226 ProSiteProfiles AP2/ERF domain profile. 52 109 IPR001471 GO:0003700|GO:0006355
Adu01g01399 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 27 226 - -
Adu01g01399 226 CDD AP2 53 111 IPR001471 GO:0003700|GO:0006355
Adu01g01399 226 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01399 Adu-Chr1 35481685 35482995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01399 43 225 AP2-EREBP Transcription Factor Family AT2G44940 49.524 2.07e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu01g01399 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01399 - - aip:107629817 353.214