Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01397 ATGACGCGACGATGCTCCCATTGCAGCCACAATGGGCATAACTCGAGGACCTGCCCGAACCGCGGCGTCAAGCTTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGCCGGTTCCGGGTCCGGTTCAGGACCTATCCACGCTTCTGGGTCCAATAACCCCGGTTCGCCCGGGGATAACCACGATAACGCGGCTACCGCTGACGGTTATGCTTCCGAGGACTTCGTTCCTGGCTCCTCTTCTAGCTCCCGTGAAAGAAAGAAGGGGGTTCCATGGACTGAGGAGGAACATAGAATGTTTTTACTTGGATTACAAAAGTTGGGCAAAGGTGATTGGCGTGGAATTGCAAGGAACTATGTTATATCAAGGACCCCTACTCAAGTGGCCAGTCACGCTCAAAAGTATTTCATCAGGCAAAGCAATGTGTCTAGACGGAAAAGACGCTCCAGCTTGTTTGACATTGTTGCAGATGAAGCAGCTGATGATACTCCAATGGTACAGCAAGACTTCTTGTCAGCTAACCAGTTACAGGCTGAAACAGAAGGCAGTAACCCCTTGCCTGCGGTTCCCACCCTCGACGAAGAGTGTGAATCCATGGATTCCACCAACTCCAATGATGGAGATTCTGTGCCATTAAAGCCTGAAAACTCTCAACCACCACAACAGCAGTCATCTTATCCGGTGCTATATCCTGCATACTATTCTCCTTTCTTCCCATTTCCTCTGCCCTATTGGTCAGGGTACAGTCCAGAGCCTAATACTGTGAAGGAGGAGACACACGAGGTACTGAAGCCAACTGCAGTGCATTCCAAAGCACCAATCAACGTTGACGAACTCGTTGGCATGTCAAAACTGAGCTTGGGAGAGACTATTGCAGACTCAGGCCCGTCCTCTCTGTCCCTGAAGCTTCAAGAAGAAGGGCCATCTCGGCAGTCAGCGTTTCATGCAACCCCAACATGTGGCAGTTCGAATATGAATGAGAGTGCCATCCATGCAGTTTGA 1062 0.4623 MTRRCSHCSHNGHNSRTCPNRGVKLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAGSGSGSGPIHASGSNNPGSPGDNHDNAATADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEAADDTPMVQQDFLSANQLQAETEGSNPLPAVPTLDEECESMDSTNSNDGDSVPLKPENSQPPQQQSSYPVLYPAYYSPFFPFPLPYWSGYSPEPNTVKEETHEVLKPTAVHSKAPINVDELVGMSKLSLGETIADSGPSSLSLKLQEEGPSRQSAFHATPTCGSSNMNESAIHAV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01397 353 MobiDBLite consensus disorder prediction 64 80 - -
Adu01g01397 353 SUPERFAMILY Homeodomain-like 106 161 IPR009057 -
Adu01g01397 353 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 107 159 IPR006447 GO:0003677
Adu01g01397 353 MobiDBLite consensus disorder prediction 331 353 - -
Adu01g01397 353 MobiDBLite consensus disorder prediction 216 246 - -
Adu01g01397 353 Pfam Myb-like DNA-binding domain 111 156 IPR001005 -
Adu01g01397 353 CDD SANT 111 156 IPR001005 -
Adu01g01397 353 SMART sant 108 158 IPR001005 -
Adu01g01397 353 MobiDBLite consensus disorder prediction 192 246 - -
Adu01g01397 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 160 IPR017930 -
Adu01g01397 353 ProSiteProfiles SANT domain profile. 112 160 IPR017884 -
Adu01g01397 353 PANTHER TRANSCRIPTION FACTOR KUA1 1 346 - -
Adu01g01397 353 MobiDBLite consensus disorder prediction 50 110 - -
Adu01g01397 353 Gene3D - 110 162 - -
Adu01g01397 353 MobiDBLite consensus disorder prediction 1 21 - -
Adu01g01397 353 PANTHER BNAC01G21010D PROTEIN 1 346 - -
Adu01g01397 353 ProSiteProfiles Myb-like domain profile. 104 156 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01397 Adu-Chr1 35449881 35455066 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu01g01397 Myb_DNA-binding 1.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01397 - - ccaj:109807943 521.931