Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01391 ATGCGTATAGAAGAATTGAAGTGTGGTGGTGAGGTGGAAGGAAATGGAGAGGAAGAGAGGTCATCAAGCTTTGGGGCCTATGATGCAAAGAAGGTTTTGGTTGGAGCGGGGGCTCGCGCGCTTTTCTATCCCACGCTGCTTTACAATGTTGTAAGGAACAAGATTCAGGCCGAATTTCGATGGTGGGATAAGGTTGACGAGTTCATATTATTAGGTGCTGTTCCATTTCCAATTGATGTTCCCCGTCTGAAGGAGCTTGGTGTTCGTGGGGTTGTCACATTGAATGAGTCATATGAGACTTTGGTTCCAACAACATTATATTATGCTCATGGAATTGACCATCTAGTGATTCCTACTAGAGATTACTGTTTTGCTCCATTGTTGCATGATATATGCCGTGCTGTGGACTTCATACATGAAAATGCATTATCTGGACACACTACATATGTCCACTGCAAAGCTGGGCGTGGTCGCAGCACAACTGTTGTTATTTGTTATCTGGTGCACCACAAACTAATGACACCGGAGGGTGCATATGATTATGTGAAGTCAATTCGACCAAGGGTGCTTTTGGCTTCATCTCAGTGGCAAGCTGTTCAGGATTACTACCGCTACCTCATGGGGAGAAGATTTGTTGGACATGCACCTTTTGCAGATCTATTTGTAAAGACTAAGGCTTCCGAGGCAGCAATAGCTTCAAGAAATCATATGATGTTTGACGATAATTCTGTAGTTGTGATAACTGAGTCAGATCTTGAAGGATATGATCCAAGCATTCAATTGCAAACTATGCCTAGTGAAATTTGGGCAGATTTAAGTGTGGTTTACCGTGTAGGGGTTGCTGGACGGGCAGCACTGGCAAGAATCTCATGCCTTTGGCTGCAGTGTGGTCCTAACCAGAAGATTTCTGCGGAGAAACTTACCAGTGATGACAGTTGCTCAATCCGGAGTAATAGCAATAACTTGGGAGGAATTAGTATCAATATCCATGTGTACTGA 999 0.4384 MRIEELKCGGEVEGNGEEERSSSFGAYDAKKVLVGAGARALFYPTLLYNVVRNKIQAEFRWWDKVDEFILLGAVPFPIDVPRLKELGVRGVVTLNESYETLVPTTLYYAHGIDHLVIPTRDYCFAPLLHDICRAVDFIHENALSGHTTYVHCKAGRGRSTTVVICYLVHHKLMTPEGAYDYVKSIRPRVLLASSQWQAVQDYYRYLMGRRFVGHAPFADLFVKTKASEAAIASRNHMMFDDNSVVVITESDLEGYDPSIQLQTMPSEIWADLSVVYRVGVAGRAALARISCLWLQCGPNQKISAEKLTSDDSCSIRSNSNNLGGISINIHVY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01391 332 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 332 - -
Adu01g01391 332 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 197 IPR000387 GO:0016311|GO:0016791
Adu01g01391 332 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 207 IPR029021 -
Adu01g01391 332 Gene3D Protein tyrosine phosphatase superfamily 61 210 IPR029021 -
Adu01g01391 332 PANTHER - 1 332 - -
Adu01g01391 332 SMART dsp_5 64 205 IPR020422 GO:0006470|GO:0008138
Adu01g01391 332 MobiDBLite consensus disorder prediction 1 18 - -
Adu01g01391 332 MobiDBLite consensus disorder prediction 1 21 - -
Adu01g01391 332 Pfam Dual specificity phosphatase, catalytic domain 101 203 IPR000340 GO:0008138|GO:0016311
Adu01g01391 332 SMART ptp_7 103 208 IPR003595 -
Adu01g01391 332 CDD PTPMT1 61 204 IPR044596 GO:0004721
Adu01g01391 332 ProSitePatterns Tyrosine specific protein phosphatases active site. 150 160 IPR016130 GO:0016311|GO:0016791
Adu01g01391 332 ProSiteProfiles Dual specificity protein phosphatase domain profile. 61 208 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01391 Adu-Chr1 34984638 34987579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01391 30 332 Protein tyrosine phosphatase (PTP) family AT2G35680 58.786 4.72e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01391 - - adu:107485250 640.188