Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01386 ATGGCGAACCAAGATGAAATCTCAGCCCTTAACCGCATCAAGCTGCATCTCTTGGGTGAACTCTCACCGCTCGGAACACCAGAGTTCACTAAAAGCAAACTCTGGCTTCAAATAGACGAACCCTCCACAGACCCTAATTTCTCTTTTCATCAATCAGAATGCCAATCTCAATCTCAGTCTGAATTTTCCCCTACCGACTCCTCAATTTCTCTCAACCACTACTTCACCGATCTTCCCCTCTTTGAATTCGATTCAAAACCTCAAGTGATCGACCTTGAATCCGACCTCGAAGCACCCAAAACCCTGCCTCAAAGTAATCCCCAAATCGAGATGAACAAGGCTCATCGCCTCAACCGGAAACCGTCGCTGCAAATCTCGCTCCCGAAGAAGAAAACCGAATGGATTCAGTTCGGAAACCCGGATCCGAAACCCGAGGCTGTGGAACCGTTCGTTCAGCAGCAGCAGCAGCAACAACAACAACAACCGGAGCCAGAGAAGAAGCACTACAGAGGCGTTCGCCAAAGGCCGTGGGGAAAATTCGCCGCGGAAATTCGTGACCCGAACAAACGAGGGTCCAGAGTGTGGCTTGGAACCTTCGACACCGCCATCGAAGCCGCCAAGGCCTACGACCGCGCTGCCTTCAAGCTCCGAGGATCCAAGGCGATCTTGAACTTCCCTCTCGAGGTTGAATCCATGACCACCTCTGCTTCTGCTTCCACCTGCGGCGATGGCGGTGATAGGAAGCGCCGCCGCGAAGAAGAGGAAGTGGCGCCGATGACGAAGGCGGTGGAGGAAGAAGTTGTTGAGGTGGTTATGCCGGTGGTGAAGAAGGAGAAGACGACTTTTGAATCGGAGGTTAACTGTATAAGGGAGCTTCCGTTAACGCCGTCCATTTGGACGGGGTTCTGGGACAGTGATGTGAAGGGAACAGGAATGGGAATATTTAGCGTGCCGCCGTTGTCACCGTTATCTTCTCCCCTTGCTGTTATGGTTGTGTGA 999 0.5225 MANQDEISALNRIKLHLLGELSPLGTPEFTKSKLWLQIDEPSTDPNFSFHQSECQSQSQSEFSPTDSSISLNHYFTDLPLFEFDSKPQVIDLESDLEAPKTLPQSNPQIEMNKAHRLNRKPSLQISLPKKKTEWIQFGNPDPKPEAVEPFVQQQQQQQQQQPEPEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFKLRGSKAILNFPLEVESMTTSASASTCGDGGDRKRRREEEEVAPMTKAVEEEVVEVVMPVVKKEKTTFESEVNCIRELPLTPSIWTGFWDSDVKGTGMGIFSVPPLSPLSSPLAVMVV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01386 332 MobiDBLite consensus disorder prediction 234 258 - -
Adu01g01386 332 MobiDBLite consensus disorder prediction 243 258 - -
Adu01g01386 332 Pfam AP2 domain 168 218 IPR001471 GO:0003700|GO:0006355
Adu01g01386 332 CDD AP2 167 226 IPR001471 GO:0003700|GO:0006355
Adu01g01386 332 SMART rav1_2 168 232 IPR001471 GO:0003700|GO:0006355
Adu01g01386 332 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 4 317 - -
Adu01g01386 332 MobiDBLite consensus disorder prediction 134 172 - -
Adu01g01386 332 Gene3D AP2/ERF domain 167 228 IPR036955 GO:0003700|GO:0006355
Adu01g01386 332 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 317 - -
Adu01g01386 332 ProSiteProfiles AP2/ERF domain profile. 168 226 IPR001471 GO:0003700|GO:0006355
Adu01g01386 332 PRINTS Ethylene responsive element binding protein signature 169 180 IPR001471 GO:0003700|GO:0006355
Adu01g01386 332 PRINTS Ethylene responsive element binding protein signature 208 228 IPR001471 GO:0003700|GO:0006355
Adu01g01386 332 MobiDBLite consensus disorder prediction 99 121 - -
Adu01g01386 332 MobiDBLite consensus disorder prediction 46 65 - -
Adu01g01386 332 SUPERFAMILY DNA-binding domain 168 228 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01386 Adu-Chr1 34822024 34823338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01386 1 324 AP2-EREBP Transcription Factor Family AT5G47230 43.452 3.84e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu01g01386 AP2 4.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01386 K09286 - gmx:100816039 314.694