LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu01g01381	ATGCTTGGCGCCAAAGAACTAAATTTTATTCAAAACACCCCTTTTGGTTTCAGTTTACAGAGCCCGCCTCTCTCCTTCTCAAAAATTGTTCTGTCTCAGTTTAGTTGTTTACACTTTACAGACCCTCTCACCTCACCCACACTACTCTGCCGAACCTGTGGCCACCGCCGATCATCCGGGTTGCACTGCAGCCAGCCTCCGACCTCGCAACTCAGACAACCTCCACCCTTTCCCATGCTTCACGCTCAGAGGTTACAGAGCCTTAACTCGCTCACACTGCTCTACTTCCTACCTGTGGCCGCCATCAACCTCCGGTCTCAGACCTTCCACCCTCGCAAACCTCTGACCTCACACCTCAGGCGACCTCCACCCCCCGTCGTTCGCGCTCACAGGTCACAGATCTCACCCACTCACACTACTCTGCCTTTTGTGTGTGGTCGCCTCCTTCGGTCTCGGACCTCGCAACCCCGCCAGCCTCCGACCCTTGTCACTTTGTGTCTTTGTGCATCTTTTGCCAAGTCTCAATTTTTTAGTTGTTTTCTTGTTTCTTCATCCGCTGCAAATACTGAATCCATCCCCACGTCAAAGCTGAGAGCTTGTATCGGGTCGGGACCAATGGTTGTTCAAATATATGTTGAAAACTCCTGTTTCACTCGACATGCTTGCCGCATATTTAATGGATCGGGAAAACCCATTGATAATGGTCCACTCATATTACCAGAGCCTTACTTGGACATATCAGGAAGTTCCATCAATCCTAGTGAGAGAACCTATCTAGACGAGATGTTACAAATCAGAATTTCTACAATTGATGTCATGAGTTCTATTGCTAGAGGTCAAAAGATCACTCTATTCTCAACTGCTGGTCTTCCCCATAATGAAATTGCTGCACAGATATGTCATAAGGCTGAAGATAAACTTGGAACAGACTTTAGTGATGATGAGAATAATAACATGAGTGATTGA	966	0.4731	MLGAKELNFIQNTPFGFSLQSPPLSFSKIVLSQFSCLHFTDPLTSPTLLCRTCGHRRSSGLHCSQPPTSQLRQPPPFPMLHAQRLQSLNSLTLLYFLPVAAINLRSQTFHPRKPLTSHLRRPPPPVVRAHRSQISPTHTTLPFVCGRLLRSRTSQPRQPPTLVTLCLCASFAKSQFFSCFLVSSSAANTESIPTSKLRACIGSGPMVVQIYVENSCFTRHACRIFNGSGKPIDNGPLILPEPYLDISGSSINPSERTYLDEMLQIRISTIDVMSSIARGQKITLFSTAGLPHNEIAAQICHKAEDKLGTDFSDDENNNMSD	321

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu01g01381	321	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	223	303	IPR027417	-
	Adu01g01381	321	MobiDBLite	consensus disorder prediction	113	132	-	-
	Adu01g01381	321	PANTHER	V-TYPE PROTON ATPASE SUBUNIT B	222	304	IPR022879	-
	Adu01g01381	321	Coils	Coil	312	321	-	-
	Adu01g01381	321	PANTHER	V-TYPE PROTON ATPASE SUBUNIT B1-RELATED	222	304	-	-
	Adu01g01381	321	Gene3D	-	211	314	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu01g01381	Adu-Chr1	34550818	34553079	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu01g01381	223	303	Primary Pumps ATPases(2)	AT4G38510	85.185	2.21e-39	143

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu01g01381	K02147		-	adu:107485570	165.236