Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01380 ATGGGGCCGTCGGATAGCAATTCTTTTGGAACAAACTCCGATGAGGAGTTCCCAAGAGGAGACGATCTAGATTTTTTAGACGACGATTCGGAGGCTGATGAAGATAGACCTCAAGATAAAAGAATAGCAGAGCTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTATAAGACTTATGCAATGACGCACGATTTCGCTGTGAGGTTGGATGAAGTCAGACGTGATAGCGATGGTTGTGTAATTATGCGCCAAATTGTTTGTAATCAGGCAGGCTTAAGAAAGGAAGAGGTTGAAAAGGATGAAAGAATCAGGGACCACCGACCCCTAACTCAAAGTTGTTGCCGGGCGAGAATTCATGCAAGACTAGATAGAAAAATTTATAAATTGAAGGTTATTTTGTTCTATGAAGAGCAATCTCATGGATTAGTTGATCCACTCGACGTTAGCATAATTCCTGAGATGGTGGAAAACTATACTTCAAGTGTAACAGTTTTGGAGTGCCCGATTGATTATGTGGTTGAGTTTGACAGAGTTAGGGGGATACTTTGTTGCGAGTGTCTGTGGTTCAAAAATAGAGTGATTCCCTACATGCACATATTCGCATGCCTAAAGCACCAACACATTGAAGTTATTCCAGAATGCTTAGTGTGCAAGCGTTGGACGAAGAATGCCAAGAGTGATTTCATGAAGTCAAATGTCGATGATCCAAGCAATTCTAATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGCTGTTGAGTGTTCTAGGTTGATGGATGTTGCATGTAAGAACTCAAGTGATTTTGTCGAAGCAATGAATGATGTTGTCAACATAATTACAAAACTCCAAAAGCACTATAACAAAAGTTATCCTAATATTCCTGGTAGAATCCCAAAGGAGCCGGTAGACGATGATACAGAAAAGAATATCAGTAGCCATCTTGACATCCTCACTAAGCACAAAAGACATGACAGTGTGAAAAATCAGCAAAAGATGGAAAAAGATAGGAGCATTGGTGGTGGAATAGCACCAACCTCAGCAGCTAAATCGGCTTTTACTGATCAAGTAAAAACATCAAGTCCTGATCCCGATATCCCGGTTTGTGCATCTACAAGTAACGAAGAGTCCGGAATGAATTCCAAACTAGCTGAGTCTCCTGTTGTGGCCCTTGAAACTAGAATGGCAGATTGA 1218 0.4097 MGPSDSNSFGTNSDEEFPRGDDLDFLDDDSEADEDRPQDKRIAELSREDIMQLQFTDEEAVYRFYKTYAMTHDFAVRLDEVRRDSDGCVIMRQIVCNQAGLRKEEVEKDERIRDHRPLTQSCCRARIHARLDRKIYKLKVILFYEEQSHGLVDPLDVSIIPEMVENYTSSVTVLECPIDYVVEFDRVRGILCCECLWFKNRVIPYMHIFACLKHQHIEVIPECLVCKRWTKNAKSDFMKSNVDDPSNSNKVLKCRLGVLAVECSRLMDVACKNSSDFVEAMNDVVNIITKLQKHYNKSYPNIPGRIPKEPVDDDTEKNISSHLDILTKHKRHDSVKNQQKMEKDRSIGGGIAPTSAAKSAFTDQVKTSSPDPDIPVCASTSNEESGMNSKLAESPVVALETRMAD 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01380 405 PANTHER OS03G0181600 PROTEIN 38 156 - -
Adu01g01380 405 PANTHER OS03G0181600 PROTEIN 167 294 - -
Adu01g01380 405 MobiDBLite consensus disorder prediction 357 389 - -
Adu01g01380 405 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 167 294 IPR031052 GO:0006355
Adu01g01380 405 Pfam FAR1 DNA-binding domain 63 152 IPR004330 -
Adu01g01380 405 MobiDBLite consensus disorder prediction 1 43 - -
Adu01g01380 405 MobiDBLite consensus disorder prediction 323 343 - -
Adu01g01380 405 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 156 IPR031052 GO:0006355
Adu01g01380 405 MobiDBLite consensus disorder prediction 323 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01380 Adu-Chr1 34408487 34410513 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g01380 FAR1 1.1e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01380 - K17604 aip:107641230 358.607