Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01361 ATGTGTACTGGTCCACATCATCAATCCAATCCTAAAACATATTATTCCTATGGTCCCAATTGGGCTAACACCACTGATATGGAGCTTAAGCACCAACTTGGTCTTCTTTGCGTTATACTGCTTTTACCAGCACTAAGCAGTGCCACTAATAAAGACTACTGCCCTTGGAATCCTTATAAGAACTCTAGAGCAACCTATTATGGTACCCGTGATGGTTATGGGACTCCAAAATACATACATACATACATATATATAAGGACGGTGAATGATGGCATGGTTGCAGCTGTATCTGGGCTATGGAATGATGGAGTTGGCTGCGGTGCATGCTATCAGGTTAAATGTAAAGTACCAAAATTATGCAATGTCAACGGGGTAACAGTGGTGGCAACAGATTATGGTCAGGGAGACAGAACAGACTTCATATTGAGCCCACGGGCCTTTAATAGTTTGGGTGTGAGCCCTGATGCATCTAAAGAGCTAAAAAAATACGGTACTCTTGATATTGCATACAAAAGAGTCCCTTGCACATACCCTGGCCGCAACATTGTTGTTAAGGTTCAAGAAAGTAGCAGCAACCCTGGATACTTTGCTGTGGTTCTTCAAAACCTTGGTGGATCATACGATGTCACTAATGTTGAATTGTGGGAGGATTCACGCAAACAATGGAGTCCATTGCGTAGGGTTTATGGGGCAGTGTTTGACTATGCTAACCCACCAAAGGGTCAACTCTTCTTGAGGTTCCAAGTGATTGGTTGTTATGGAACTTATTGGCAAATACCAAAGAAACCTATCCCTGCTGATTGGAAGCCCAAAATTACTTATGACACTGGACTTCAGCTTAAATAA 846 0.4232 MCTGPHHQSNPKTYYSYGPNWANTTDMELKHQLGLLCVILLLPALSSATNKDYCPWNPYKNSRATYYGTRDGYGTPKYIHTYIYIRTVNDGMVAAVSGLWNDGVGCGACYQVKCKVPKLCNVNGVTVVATDYGQGDRTDFILSPRAFNSLGVSPDASKELKKYGTLDIAYKRVPCTYPGRNIVVKVQESSSNPGYFAVVLQNLGGSYDVTNVELWEDSRKQWSPLRRVYGAVFDYANPPKGQLFLRFQVIGCYGTYWQIPKKPIPADWKPKITYDTGLQLK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01361 281 SUPERFAMILY PHL pollen allergen 180 275 IPR036749 -
Adu01g01361 281 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 194 276 IPR007117 -
Adu01g01361 281 PANTHER EXPANSIN-B3 28 280 - -
Adu01g01361 281 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 68 180 IPR007112 -
Adu01g01361 281 Gene3D - 42 175 IPR036908 -
Adu01g01361 281 PANTHER EXPANSIN-B1-LIKE PROTEIN 28 280 - -
Adu01g01361 281 Pfam Lytic transglycolase 97 162 IPR009009 -
Adu01g01361 281 Pfam Expansin C-terminal domain 182 249 IPR007117 -
Adu01g01361 281 PRINTS Expansin/Lol pI family signature 163 179 IPR007118 GO:0005576
Adu01g01361 281 PRINTS Expansin/Lol pI family signature 96 114 IPR007118 GO:0005576
Adu01g01361 281 PRINTS Expansin/Lol pI family signature 262 276 IPR007118 GO:0005576
Adu01g01361 281 PRINTS Expansin/Lol pI family signature 58 73 IPR007118 GO:0005576
Adu01g01361 281 SUPERFAMILY Barwin-like endoglucanases 53 179 IPR036908 -
Adu01g01361 281 Gene3D - 176 276 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01361 Adu-Chr1 33909829 33912652 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01361 27 280 Expansin Gene Family AT4G17030 45.349 2.11e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01361 - - adu:107485050 592.423