Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01358 ATGAGTGATGATGAGGAATTGGAAGAAAAGAATAATAATGAAGCAAAGGAGGAGGAGGAGGAGGATAACAATGAAGAAGAAGGGAATTCAACAAACCCAAGTAGCAACAGCACAACATCAAGAGAAAGGAAGAGAGGGAGTGGTGTGAGACAATATGTGAGATCAAAGATGCCAAGGCTTTGTTGGACTCCTAATCTTCATCTCTCCTTTGTCCATGCTGTTCAGAGGCTTGGAGGTCAAGAAAGAGCAACACCTAAATTGGTGCTTCAGCTAAGGAATGTCAGAGGCCTAAGCATTGTTCATGCCAAGAGTCACTTGCAGGAGTTAATTGATTTTCTGAAAGAAACTGGGCTGTAG 357 0.4258 MSDDEELEEKNNNEAKEEEEEDNNEEEGNSTNPSSNSTTSRERKRGSGVRQYVRSKMPRLCWTPNLHLSFVHAVQRLGGQERATPKLVLQLRNVRGLSIVHAKSHLQELIDFLKETGL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01358 118 MobiDBLite consensus disorder prediction 1 51 - -
Adu01g01358 118 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 7 107 - -
Adu01g01358 118 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 109 IPR006447 GO:0003677
Adu01g01358 118 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 107 IPR044848 GO:0003700
Adu01g01358 118 SUPERFAMILY Homeodomain-like 56 114 IPR009057 -
Adu01g01358 118 MobiDBLite consensus disorder prediction 1 27 - -
Adu01g01358 118 MobiDBLite consensus disorder prediction 28 42 - -
Adu01g01358 118 Coils Coil 1 29 - -
Adu01g01358 118 Gene3D - 57 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01358 Adu-Chr1 33794752 33795942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01358 49 107 G2-like Transcription Factor Family AT2G42660 76.271 1.88e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu01g01358 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01358 - - aip:107618142 151.369