Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01343 ATGGAACTTAGTTTAAAGCACCAAGTTGGGCTTATGTGTGTTATATTACTCTTACCTTCGCTATGTAGCTCACAGGATTCTTTCACTGATTCCAGAGCAACCTATTATGGCAGCCCTGATTGCTATGGCAATCCAAGGGGAGCTTGTGGCTTTGGAGAATATGGAAGGACAGTCAATGATGGCAGTGTTGCAGCGGTGTCTAGGCTATGGAGGAATGGAACTGGCTGTGGTGCATGCTACCAGGCAAGGTGCAAATTAGAGCAATACTGCGACGAGGAGGGAACCTACGTGGTGGTAACAGACTACGGCGAAGGAGACAGAACAGACTTCGTTTTGAGCCCACGCGCCTACAAGAAGTTGGGACGAAACGATAAAGCTGCAGCAGAGCTATTCAAATATGGTGTGGTTGACATTGAATACCGAAGGGTCCCTTGCAGATATGAAGGCTACAACATTGTCTTTAAGGTCCATGAACGAAGCAAGAATCCTGAATACTTTGCTGTTGTCATTCTCTATGTTAATGGTGCTTATGATGTAACTGCTGTTCAGTTGTGGCAGGAAGATTGCCAAGAATGGACAGAAATGAGGAGGGTTTATGGGGCAGTGTTTGATTATGCCAATCCACCAAGTGGTGAAATCAATTTGAGGTTCCAAGTGAGTGGCAGTGCAGGTATCTATTGGGTGCAATCCCAGAATGCTATTCCTAGTGATTGGACTGCTGGAGCTGCTTATGATTCACAGGTTCAGCTTACTTAA 756 0.4563 MELSLKHQVGLMCVILLLPSLCSSQDSFTDSRATYYGSPDCYGNPRGACGFGEYGRTVNDGSVAAVSRLWRNGTGCGACYQARCKLEQYCDEEGTYVVVTDYGEGDRTDFVLSPRAYKKLGRNDKAAAELFKYGVVDIEYRRVPCRYEGYNIVFKVHERSKNPEYFAVVILYVNGAYDVTAVQLWQEDCQEWTEMRRVYGAVFDYANPPSGEINLRFQVSGSAGIYWVQSQNAIPSDWTAGAAYDSQVQLT 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01343 251 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 250 - -
Adu01g01343 251 Pfam Lytic transglycolase 64 140 IPR009009 -
Adu01g01343 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Adu01g01343 251 Gene3D - 146 247 IPR036749 -
Adu01g01343 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Adu01g01343 251 PANTHER EXPANSIN-B3 4 250 - -
Adu01g01343 251 Pfam Expansin C-terminal domain 152 235 IPR007117 -
Adu01g01343 251 SUPERFAMILY PHL pollen allergen 151 246 IPR036749 -
Adu01g01343 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Adu01g01343 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Adu01g01343 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Adu01g01343 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Adu01g01343 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Adu01g01343 251 Gene3D - 19 145 IPR036908 -
Adu01g01343 251 SUPERFAMILY Barwin-like endoglucanases 13 149 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01343 Adu-Chr1 33007264 33009362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01343 5 251 Expansin Gene Family AT4G17030 60.714 2.25e-115 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01343 - - gmx:100779487 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00463 05 4834895 4836669 Adu01g01343 01 33007264 33009362 PCT