Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01326 ATGTTCTTTGTGTTCAAGACAGAGTTTTCTATTTTCCTGGAACCTGCAGAACAAGAATTGAGGCAGGTGAAGAACCAGAAATCTCCCAAATACAATCTTCCATGGAAGATCTTATGTGGTGTTATTGATGCCGAGATGGAAAGCGGCGAGGCTTATGCTCGACTCACTTTGCAACCATCTTCAGATGATATGACAATGGAAAATCCTACTCAAGAGTTGGTAGCAAAGGATATTCATGGGGTTGAATGGAAGTTTAAGCATATATACAAAGGACTTCCAAAGAGGCACTTGCTTACAATTGGCTGGAGCGCATTTGTTGCCAAAATATAA 330 0.4061 MFFVFKTEFSIFLEPAEQELRQVKNQKSPKYNLPWKILCGVIDAEMESGEAYARLTLQPSSDDMTMENPTQELVAKDIHGVEWKFKHIYKGLPKRHLLTIGWSAFVAKI 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01326 109 PANTHER AUXIN RESPONSE FACTOR 11 63 107 - -
Adu01g01326 109 SUPERFAMILY DNA-binding pseudobarrel domain 59 105 IPR015300 -
Adu01g01326 109 PANTHER AUXIN RESPONSE FACTOR 11 13 63 - -
Adu01g01326 109 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 63 107 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu01g01326 109 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 63 IPR044835 GO:0003677|GO:0006355|GO:0009725
Adu01g01326 109 Gene3D - 6 108 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01326 Adu-Chr1 32228429 32229247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01326 23 107 B3 DNA Binding Superfamily AT2G46530 37.857 6.41e-24 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu01g01326 None None None