Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01290 ATGGAATTTGACACGGTACTAGAAGCTAAAGACTTCTGGAAAAGTTATGGTGGAATGATGGGTTTTGATATTCGACAATTGTATGCAAATAAATGCAAGCTTGATAATTCTGTAAGTAGTTTTAGACTTGTTTGTGCAAAGGAAGGCCAACGAAGACCAGATAAACGGGATCATTTAACAAAGCAACCTCGCGCCGAGACTAGAACAAGTTGCCAAGTAAGAATGTTACTCAAGTTTGCTCGAGATATAAAAAAATATGTGATTTGTGACCTTGAGTTAAATCACAATCATATTTTGCAAATTCCGAAAACCAGTCATATGATGCCATCACAAAGAAAGATTTCAGAAGTACAAGCATTGCAAATAGATTTGGCAGATGAAGCTGGCATAAGACCAAAGGAAACACATGAACTAACAAGTTTACAAGCTGGTGGGAATAAGTTGAAAGATGGTTCTTTTATCTTGAGAGATTTCAAAGCTTGTATGTATAATTCTAAAGATCAGTTTCAATTTCAAGAGACATGGGATGCATTGCTTCAAATATACAAAGTGGAAGACAATTCTTGGTTGAAGAGTATTTATAAAGTAAAGGAAAAATGGGCTCATTGCTATATGAAGAAGGTGTATACTATTGGAATGCGAAGTACTCAACTTAGTGAAAGTTTTAACAGTGATTTGAAAGATTTTATGCGGTCAAATTTAGACATAATACATTTTCTCAAACAGTTTGAGCGAGCTGTTGGTGGCAAGCGATACAAAGAGCTACAAGCTGAATACAATGAAAGACAAAAGCTTCCTAGACTTAAGATGATTCATTCGCCGTTATTGAAGCATGCTGCACAGGTATATACTCCTAATGCATTTGATTTATTTCAAAATGAGTTTGATTGGAGTTCTGCTGCATATATTGTTTCTCGTACAGAGAACAATCAAATGTTTGAATATCAAGTTGCTATTTTTGATAAAGATGGAGAATGCACGGTATCTGGCAATGTGAAAGATATGATTATTTCTTGTAGTTGTGAAATGTTCGAAACAATGGGATTCTTATGTTGTCATAGTTTAAAAGTTTTAAATGTTTGGGATGTGAAGCAAATTCTGGCTCAATACATTATAAAAAGATGGACTAGAGAAGCAAGAGAGATGATTGTTCATGACTCAGATGGAAAAGTTGTTCAAAGTGATACTAGAGCGGATGCTACAGCACACTATAAGAATATATGTTTTAAAGCAATCAAATTGGCTGCTCGATCATCAGATTTTGAAGTAACATCTAATTTTGTTGAGCAAGTTATAGAGGAGGCATATAAGAAGGCTGAAATTTTCACTTCAAATATTGAAAATCAAGCTATTTTGTCACTTCAATCATGGAATCAAATTACAACACCAAATGGAGTGAAGTTACAACACCAAATTTAG 1419 0.3425 MEFDTVLEAKDFWKSYGGMMGFDIRQLYANKCKLDNSVSSFRLVCAKEGQRRPDKRDHLTKQPRAETRTSCQVRMLLKFARDIKKYVICDLELNHNHILQIPKTSHMMPSQRKISEVQALQIDLADEAGIRPKETHELTSLQAGGNKLKDGSFILRDFKACMYNSKDQFQFQETWDALLQIYKVEDNSWLKSIYKVKEKWAHCYMKKVYTIGMRSTQLSESFNSDLKDFMRSNLDIIHFLKQFERAVGGKRYKELQAEYNERQKLPRLKMIHSPLLKHAAQVYTPNAFDLFQNEFDWSSAAYIVSRTENNQMFEYQVAIFDKDGECTVSGNVKDMIISCSCEMFETMGFLCCHSLKVLNVWDVKQILAQYIIKRWTREAREMIVHDSDGKVVQSDTRADATAHYKNICFKAIKLAARSSDFEVTSNFVEQVIEEAYKKAEIFTSNIENQAILSLQSWNQITTPNGVKLQHQI 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01290 472 Pfam FAR1 DNA-binding domain 11 100 IPR004330 -
Adu01g01290 472 PANTHER OS02G0542200 PROTEIN 2 114 - -
Adu01g01290 472 ProSiteProfiles Zinc finger SWIM-type profile. 315 362 IPR007527 GO:0008270
Adu01g01290 472 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 150 443 IPR031052 GO:0006355
Adu01g01290 472 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 114 IPR031052 GO:0006355
Adu01g01290 472 SMART 26again6 337 364 IPR006564 GO:0008270
Adu01g01290 472 PANTHER OS02G0542200 PROTEIN 150 443 - -
Adu01g01290 472 Pfam SWIM zinc finger 315 359 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01290 Adu-Chr1 30487926 30490213 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g01290 FAR1 2.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01290 - - adu:107484087 669.463