Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01254 ATGGGGTGTTTACATTCAAAAACCGCTCATCTTCAATCTCCTGAAGACCCTCCCACTGACTTACCAGACCCCAACAAGCCCGATCCAGGTGATGGGGTTGGTGGTGATGATGGTGAAGAGAGTGAGGTTCCGGCATTCAAAGAGTATAGTTTAAGTGAACTGAGAAGGGCGACAAATGAGTTCAACGCAAAGAACATAGTTTCAGAGAGTGGAGAGAAAGCTCCGAACGTTGTGTACAAAGGGAAGCTTGAGAACAATCGCTTCGTTGCTGTTAAGCGTTTCTCCAAACTTTCTTGGCCTGATGCTCAGCAGTTCATGGTAGAGGCTGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGCTGTTGCGCCGAAGGAGATGAGCGGCTCTTGGTAGCCGAGTTTATGCCAAATGATACTTTGTCAAAGCATCTCTTTCATTGGGATAAGCAACCGTTACCATGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCTCAGGCATTGGATCATTGTAGCAACGAAAACCGGAAAATATATCATGATCTGAATGCCTATAGGATTCTCTTCGATGAGGATGGTGATCCCCGTTTATCTAGTTTTGGGCTTATGAAAAATAGTCGAGATGGAAAAAGCTACAGTACTAACTTAGCATATACCCCACCTGAATTTTTGCGAACAGGTAGGATAATCCCTGAGAGTGTGATTTACAGTTATGGAACTGTTCTTCTGGATCTTTTGAGCGGCAAGCATATTCCTCCGAGCCATGCACTAGACCTAATTAGAGGGAAAAATGTATTGATGTTGATGGACTCGTCCCTCGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAGTGTCTTCAGTTTGAGGCTAGAGAACGACCCGATATCAATTTTCTTCTTACTGCAGTTACACCCCTTCAGAAGCAGAAAGAGGTAGCATCACATGTGTTAATGGGCCTTACAGTGAATAATACACCGGTGCTTCCGACCATACTTTCTCCCCTCGGAAAGGCGTGTGCGAGAATGGATCTTACTGCGGTGCATGATATATTGTTAAAAACTGGTTATAAAGACGAAGAAGGTGCAGAAAATGAGCTTTCTTTCCAAGAGTGGACACAACAAGTGCAAGATATATTGAACACAAAAAAGTTTGGGGATATTGCATTTAGAGACAAGGACTTCAAAAATGCAATTGAGTATTATTCTAAGTTGGTGGTTATGATGTCGGTTCCTTCTGCAACCGTGTTTGCAAGGAGATCCTTCTCCTACTTAATGAACGATCAGGCGGAACTTGCGTTACGCGACGCCATGCAGGCGCAGGTATGCATATGTGATTGGCCAACTGCGTTCTACCTGCAGGCTCTGGCTCTCTCGAAGCTGGGAATGGACACAGATGCTCAGGACATGCTTAATGATGGAGCAGCCTTTGAAGCCAAGAGGTCTAACAGTTGGCGTGGCTAG 1497 0.4482 MGCLHSKTAHLQSPEDPPTDLPDPNKPDPGDGVGGDDGEESEVPAFKEYSLSELRRATNEFNAKNIVSESGEKAPNVVYKGKLENNRFVAVKRFSKLSWPDAQQFMVEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEFMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSNENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLMLMDSSLEGQYANDDATKLVELASKCLQFEARERPDINFLLTAVTPLQKQKEVASHVLMGLTVNNTPVLPTILSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRSFSYLMNDQAELALRDAMQAQVCICDWPTAFYLQALALSKLGMDTDAQDMLNDGAAFEAKRSNSWRG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01254 498 Gene3D Tetratricopeptide repeat domain 388 497 IPR011990 GO:0005515
Adu01g01254 498 ProSiteProfiles Protein kinase domain profile. 64 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g01254 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 497 - -
Adu01g01254 498 SUPERFAMILY TPR-like 392 493 IPR011990 GO:0005515
Adu01g01254 498 Gene3D Transferase(Phosphotransferase) domain 1 141 333 - -
Adu01g01254 498 MobiDBLite consensus disorder prediction 1 45 - -
Adu01g01254 498 SUPERFAMILY Protein kinase-like (PK-like) 42 316 IPR011009 -
Adu01g01254 498 Gene3D Phosphorylase Kinase; domain 1 36 139 - -
Adu01g01254 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 497 IPR045845 GO:0004672|GO:0009742
Adu01g01254 498 Pfam Protein tyrosine and serine/threonine kinase 77 312 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01254 Adu-Chr1 28335516 28340898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01254 14 315 Glycoside Hydrolase AT3G07070 33.846 4.24e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Adu01g01254 PK_Tyr_Ser-Thr 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01254 K14500 - gmx:100793576 900.968