Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01245 ATGGGAGGGGCATCACTGCCACCTGGATTTCGTTTCCACCCAACGGATGAAGAATTATTGGGATATTACCTAAAAAGAAAAGTGGAAGGGCTTGAAATTGAGCTTGAGGTTATTCCTGTGATTGATTTGTGCAAGTTTGATCCTTGGGAATTGCCCGAGAAATCATTGTTGGCAAACAGAGACATGGAATGGTTCTTCTTTTGTCCAAGGGACCGCAAGTACCCAAATGGATCAAGAACTAACAGAGCCACCAAAGCTGGTTATTGGAAAGCCACTGGAAAAGACAAGAAAGTTGTGTGCCAATTTGATACTCCTTCCACTGTCACAGGATATAGAAAAACCCTTGTCTTCTACCGTGGCAGAGCCCCTTTAGGTGACAGAACTGATTGGCTCATGCATGAGTATCACCTCGCCGATGATCTCGGCCTAGCATCTACATGTTTTCAGGGTGGTTATGCCTTGTGTCGGGTTATTAAGAAGAATGAGAAGGTGAACAATGGGAATGATGCGTCAATGAGATTCTCCAATGAGCCCTTCTCCATTTCTGCTGATGCTTCATCTTCTCAACCAAGTTATTTGAACAGTGAGAGTGTTTACTCAAGCCCCAATGCTTCTTCACACAATGTGGCTCCAATGGCAGACTCTAACCAAGCTTCTATAAACACCAGTTCTTCATCAGAATTTTGGGTGTCCCCTGATCTGATTCTTGATTCTTCAAAGGACTACCCGCAACTAGAAAATACTTTTACAAGGTGTGACATACCAAGTAGTACAATGACACCATGCCTCTCATTGGATCAACCTGAAATTTCACCTTGTTCATCATACTCAAATTTTAATGGGCAACTTGGATTTTCCGATGATTTCAATATGATTGGCGGCATGTCACCTTACTCAATACAAGAAGATTTTATGTACTTTCATGGAAATGATGGGGATGTTTCTTATGGAAGTTATGATCATATTAATTCAGTTGAGTACCCTGAATACTTCTGA 996 0.4177 MGGASLPPGFRFHPTDEELLGYYLKRKVEGLEIELEVIPVIDLCKFDPWELPEKSLLANRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKVVCQFDTPSTVTGYRKTLVFYRGRAPLGDRTDWLMHEYHLADDLGLASTCFQGGYALCRVIKKNEKVNNGNDASMRFSNEPFSISADASSSQPSYLNSESVYSSPNASSHNVAPMADSNQASINTSSSSEFWVSPDLILDSSKDYPQLENTFTRCDIPSSTMTPCLSLDQPEISPCSSYSNFNGQLGFSDDFNMIGGMSPYSIQEDFMYFHGNDGDVSYGSYDHINSVEYPEYF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01245 331 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 331 - -
Adu01g01245 331 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Adu01g01245 331 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Adu01g01245 331 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 331 - -
Adu01g01245 331 Pfam No apical meristem (NAM) protein 7 137 IPR003441 GO:0003677|GO:0006355
Adu01g01245 331 ProSiteProfiles NAC domain profile. 6 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01245 Adu-Chr1 27865795 27868019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01245 1 252 NAC Transcription Factor Family AT4G17980 58.268 1.83e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu01g01245 NAM 3.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01245 - - aip:107605232 539.265