Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01243 ATGAAGTTAGGCGTGGATCTAGTGAAGCCAAgtggtccccacgttataagACCAAGCAGAAGATTCTCAGATAGAATTCATAGAGGTAAGAATGACCTTGATCAAGCTCAGATTACAGATGTGTATAATTATAGGTTTCAAGAAATTGTACCTCTTATTGCTGGTAACATTTTCGGAACAGAAGACAATGGCCCTGCAAGGAAATGGATTGCTCTTGTTAATAAGACCCTTAACAGTCTTATAGGAACACGTGGACTCAAGAAAGGCCGTTGGACAAATGAGGAGGATCAAATCTTGACCAACTACATTCAAGCCATTGAAGAAGGTTCTTGGAGGGCTTTGCCTAAGAATGTTGGGTTTCTAAGATGTGGCAAGAGTTGCAGATTGAGATGGATTAACTATTTGAGAGCTGATCtcaaaagaggaaacatctctattgaagaggaagccatcatcactaagTTGCATGCTTCTTTTGGCAACAGGAATATGATCCCTAGTAACTTTACTATGAATACATCTAATGTGATGGCTAGTTTGGCCACAGATCTGCTAGGATCAGCATCAAAGACAGAAAACACCAATTTTCTTAAATTCGCTTTCTTTTCAGGCCTTCCTGTTTATTACCTACAAAAGTAA 639 0.3505 MKLGVDLVKPSGPHVIRPSRRFSDRIHRGKNDLDQAQITDVYNYRFQEIVPLIAGNIFGTEDNGPARKWIALVNKTLNSLIGTRGLKKGRWTNEEDQILTNYIQAIEEGSWRALPKNVGFLRCGKSCRLRWINYLRADLKRGNISIEEEAIITKLHASFGNRNMIPSNFTMNTSNVMASLATDLLGSASKTENTNFLKFAFFSGLPVYYLQK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01243 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Adu01g01243 212 CDD SANT 90 135 IPR001005 -
Adu01g01243 212 Pfam Myb-like DNA-binding domain 88 135 IPR001005 -
Adu01g01243 212 Gene3D - 85 141 - -
Adu01g01243 212 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Adu01g01243 212 PANTHER MYB TRANSCRIPTION FACTOR 85 167 - -
Adu01g01243 212 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 85 167 - -
Adu01g01243 212 SUPERFAMILY Homeodomain-like 89 162 IPR009057 -
Adu01g01243 212 SMART sant 87 137 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01243 Adu-Chr1 27728828 27733818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01243 85 175 MYB Transcription Factor Family AT2G47460 65.217 2.52e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu01g01243 Myb_DNA-binding 8.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01243 K09422 - gmx:100788260 142.124