Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01216 ATGGCTGGTTTGGATTTAGGAACAGCATCACGCTTCGTTCAAAATCTTCACAGACCAGACTTACACCTTCAGCAACAACACCATTACCAAGATTCCCAAGAACAACAACAACACCACACACCAGATCGTGCACCTGCACCTCAGTTCTCCGGCGAAGAAGATGATACCAGCCAAGGCGGCGGAAGCGGAAGCGGCGGTGGAGGCGCTTTTGAGCTCGGCTCCGGCTCTGGAGGCCGGCGCCCCCGAGGCCGTCCGCCGGGCTCGAAGAACAAGCCGAAACCGCCAGTCATCATCACAAGAGAGAGTGCCAACACGCTAAGAGCTCACATCCTCGAAGTTGCGAGCGGCTCCGACGTCTTCGACAGCGTCGCTACCTACGCGCGGCGGCGCCAGCGCGGGATCTGCATCTTGAGCGGCAGCGGAACCGTGACCAATGTTACTATCCGGCAGCCAGCTGCGGCAGGCTCCGTTGTCACGCTCCAGGGAAGGTTCGAGATCCTGTCGCTCTCCGGCTCCTTCCTCCCGCCGCCTGCACCGCCCGGTGCCACCAGCCTCAGCATATACCTCGCTGGCGGCCAGGGACAGGTAGTCGGTGGAAACGTCGTCGGAGAGCTGATCGCGGCGGGGCCAGTGATC 636 0.6132 MAGLDLGTASRFVQNLHRPDLHLQQQHHYQDSQEQQQHHTPDRAPAPQFSGEEDDTSQGGGSGSGGGGAFELGSGSGGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASGSDVFDSVATYARRRQRGICILSGSGTVTNVTIRQPAAAGSVVTLQGRFEILSLSGSFLPPPAPPGATSLSIYLAGGQGQVVGGNVVGELIAAGPVI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01216 212 ProSiteProfiles PPC domain profile profile. 103 212 IPR005175 -
Adu01g01216 212 MobiDBLite consensus disorder prediction 16 96 - -
Adu01g01216 212 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 212 - -
Adu01g01216 212 CDD DUF296 107 190 IPR005175 -
Adu01g01216 212 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 211 - -
Adu01g01216 212 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 211 IPR005175 -
Adu01g01216 212 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 212 IPR014476 GO:0003680
Adu01g01216 212 Gene3D - 106 212 - -
Adu01g01216 212 MobiDBLite consensus disorder prediction 21 38 - -
Adu01g01216 212 PIRSF ESCAROLA 10 212 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01216 Adu-Chr1 25902539 25903174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01216 1 212 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 72.018 5.57e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01216 - - pvu:PHAVU_003G230600g 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00522 05 5471453 5473167 Adu01g01216 01 25902539 25903174 PCT