Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01207 ATGGAATCGTCATCACCTAGCTGGTTACATGATCTGCAGGAAATGGAAGATGATTACAACAATTTCTTTCCGAAAGAGTACAGGATGAACAACTCGATTGATGATTATGATGAAGATTTATTTTTCGCACATGACATGGGGAATTCAATAATGTTCGAGTCACCAAGCAATAATAATAATTACTCTTCCGTTGATGAAACTAGTTTTGATGATGAGAGGCCTTCTAAGTTTCTCAAAACAAGTACCAATACTGATAATAATTCTTATTATTCATCATTATCACCAAATTTTTCTTCCCTCTCATCATCATCAATAACATCATTTCAGCCACAAATTCTGTGCTTTGACAACTCAAACTCCTCTCTCAATAATAATGATAATACCACCCAGCTTTATGATTTAGATTATACAACCTTGAACACAGAGACAAAACTAAAAGAGGTGGTAAATGGGTCATCAAAAAATCAAAACCTGGTCACAAAATCCTCATCAAAGGGTTCTAAGAGATCACCATCTAACGCTCAGGATCATATCATAGCTGAGAGGAAGAGAAGAGAGAAGATCAGCCAGAGTTTCATTGCTCTTGCAGCTCTTGTTCCTGGCCTCAAGAAGATAGACAAAGTTACTGTGTTAGAGAATGCAATCAAGTACGTGAAGGATCTCAAAATTCGTCTTACAACACTAGAACAAGAAAATAATGAAAAAATAAAGGAAATAGTAGAAGAGCCTTCTGTGATTGTTCTTAACAAAAGGTTACCACATGATAATGAGAGTGACGATGAGAGCGTTATTGTTGATAATACTTCTAATCATGATTCTTCTTCACTTCTCCATCATGTGGAAGCAAGAGTATCAGGGCAACATGTTTTGATTCGGATTCAGTGTCAAAAGCATAAGGGTATTTTAGTCAAATTACTTTCTGAGATTCAAGGACATAACCTGCTTGTTTTAAATAGTAGTGCGTTGCCTTTTGGAGATTCGGTTCTTGATATAACTATCATTACTCGGATGGGCGAAGGGTACAATTTGACCGTTAAGGAACTTGTCAAGAGCATACGCGTGGAAACATTGAAGTTCATCTTGTCATAA 1089 0.3627 MESSSPSWLHDLQEMEDDYNNFFPKEYRMNNSIDDYDEDLFFAHDMGNSIMFESPSNNNNYSSVDETSFDDERPSKFLKTSTNTDNNSYYSSLSPNFSSLSSSSITSFQPQILCFDNSNSSLNNNDNTTQLYDLDYTTLNTETKLKEVVNGSSKNQNLVTKSSSKGSKRSPSNAQDHIIAERKRREKISQSFIALAALVPGLKKIDKVTVLENAIKYVKDLKIRLTTLEQENNEKIKEIVEEPSVIVLNKRLPHDNESDDESVIVDNTSNHDSSSLLHHVEARVSGQHVLIRIQCQKHKGILVKLLSEIQGHNLLVLNSSALPFGDSVLDITIITRMGEGYNLTVKELVKSIRVETLKFILS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01207 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 241 IPR036638 GO:0046983
Adu01g01207 362 MobiDBLite consensus disorder prediction 148 176 - -
Adu01g01207 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Adu01g01207 362 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 2 360 - -
Adu01g01207 362 SMART finulus 178 227 IPR011598 GO:0046983
Adu01g01207 362 Pfam Helix-loop-helix DNA-binding domain 176 221 IPR011598 GO:0046983
Adu01g01207 362 Coils Coil 211 238 - -
Adu01g01207 362 MobiDBLite consensus disorder prediction 148 174 - -
Adu01g01207 362 Gene3D - 163 238 IPR036638 GO:0046983
Adu01g01207 362 PANTHER BHLH TRANSCRIPTION FACTOR 2 360 - -
Adu01g01207 362 MobiDBLite consensus disorder prediction 53 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01207 Adu-Chr1 24552728 24561137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01207 5 360 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 33.242 1.05e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu01g01207 HLH 6.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01207 - - ahf:112720570 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01207 01 24552728 24561137 Adu01g01207 01 24552728 24561137 ECH