Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01206 ATGCTAGGAAGCATCAACGATGAAACCTTTTCACCGAAACTTTCTTCATCATCTTCAATTTTATCCTTAAGGTCTCAGATTCTGTCCTTTGATAACTCAGACTCGTTATCATCGTCTCCATCCAATAATACGACAGAATTTTATGAGTTGAAAAACACCTTAAACCAAAGACAAGACTCAGTTGAAACTCCAAATAATAATAATAAAAAGAGTGATTCCTTGAATACACAAAATGTGGAAGCAAAGAGTACCTCAACACTTGGTAAGAGGTCACCATCTCATGCTCACGATCATATCATAGCTGAGAGAAAGAGAAGAGAGAAGATCAGTCAGAGTTTCATTGCTCTTGCAGCCCTTGTTCCTGGCCTCAAGAAGATGGACAAGGCTTCTGTGTTGGGGGACTCTATCAGGTATGTGAAAGAGCTGAAAGAGCGTTTGGCAGTGCTCGAAGAAGAATCCAAGAAAACAAAGGCGAAAAAAGCAGAACAACTCCATGGTCATGGTGCTGCTGTGTTCTCCTCGTTATGCGAAGAGACCATTGATGGTAGTCTTCCACAGGTTGAAGCAAGAGAGTGGGGGCAACAAGTGTTGCTTCGAATCCACTGCTGGAAGGAAGAGGGCATTTTGGTCAGAATATTGTCTGAGATTCAAAGCCTTCAATTGATGCTTCTTAATAGCAGTGTCTTATCATTTGGAGATTCCATTCTTGACATAACCATCATTGTTCAGGCGGGCGAAGGTTACAACTTGACCCTTAATGAACTTGTCAAGAACCTACGCACCGCTACTTTGAAACTCATGTCATAG 807 0.4164 MLGSINDETFSPKLSSSSSILSLRSQILSFDNSDSLSSSPSNNTTEFYELKNTLNQRQDSVETPNNNNKKSDSLNTQNVEAKSTSTLGKRSPSHAHDHIIAERKRREKISQSFIALAALVPGLKKMDKASVLGDSIRYVKELKERLAVLEEESKKTKAKKAEQLHGHGAAVFSSLCEETIDGSLPQVEAREWGQQVLLRIHCWKEEGILVRILSEIQSLQLMLLNSSVLSFGDSILDITIIVQAGEGYNLTLNELVKNLRTATLKLMS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01206 268 Pfam Helix-loop-helix DNA-binding domain 98 142 IPR011598 GO:0046983
Adu01g01206 268 PANTHER BHLH TRANSCRIPTION FACTOR 7 268 - -
Adu01g01206 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 98 159 IPR036638 GO:0046983
Adu01g01206 268 MobiDBLite consensus disorder prediction 55 90 - -
Adu01g01206 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
Adu01g01206 268 Coils Coil 132 159 - -
Adu01g01206 268 MobiDBLite consensus disorder prediction 55 97 - -
Adu01g01206 268 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 7 268 - -
Adu01g01206 268 Gene3D - 83 160 IPR036638 GO:0046983
Adu01g01206 268 SMART finulus 99 148 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01206 Adu-Chr1 24284138 24286654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01206 68 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.050 9.84e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu01g01206 HLH 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01206 - - adu:107482811 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01206 01 24284138 24286654 Adu01g01206 01 24284138 24286654 ECH
Adu05g00531 05 5650531 5652093 Adu01g01206 01 24284138 24286654 PCT