Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01202 ATGTGGCGTCCTCCGCTGTTGCCGTCACCGCCGCCGCCGCGGCTCGCGTCGCACGAGCTCCTTCCACTGCCGCTCTCAATGCGTTTGCTCCTTTCGTCGTCACACGAGCTCTCTCAGCCGTGCTCTTGTCTTACGAGCTCCCTCTGCCGCTGCTCTCGCGCTGCTTCTTCTCTCCTCGCCGGAGGTTTGTCATCGTCTTCTCTCATCGCTGTTAGTTCAGGTCCGCTGAAGATATGGGATTCAATTATGACTGGTGGATTTGAATTCTATAAGATGGACGGATTTCCAGGAGCACTTTCAGTTATTTCAGCTATAGATGAAGAAGTTAAATCTGAGAATGTAGATTCAATGTTCCACATTGGAGACATAAGCTATGCCACTGGTTTTCTAGTAGAATGGGATTTCTTCCTTAGCCTTATTAATCCAGTAGCTTCCAGAGTTTCTTATATGACAGCAATTGGGAACCATGAGAGGGATTATGTGAATTCTGGTTCAGTATACATCACTCCTGATTCTGCAAGTGTTCATTTCACTGTTATATCAACCGAGCATGATTGGTCACAAAATTCTGAGCAGTATGCATGGATGAAAAAGGACATGGCTTCAGTTAATAGACAAAAAACTCCATGGCTAATATTCATGGGACATAGGCCAATGTATACCTCAGATCATTCATCTGCTGACAAGAATTTTGTTGCAACTCAAGCAGCGCTTGTGCTTAACGCTTCTCGCCGATTTCGCTACACCTTGGACCTGAAGAAAGAAGAAGAAAAGGAGCAAGTGCTGAGAAAGATTAGAGGGCATGTTCAAGTCATCAAAATGTTTGTTTGGGATGCTTGCAAGGATCTGACCTTGATTATTTCAATCGTAGCTGCTACAGCTTCATTAGTACTGGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTGGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGGGACCTAAATGAGGAGAAGAGAAACATTCATTTGGAGGAGGTAGAAGAGTTGAGATCTCAATCTAATATGACTGGGGAGAGCAATATTGTTGAAAAGAATTCTAAGAACCCTATTCTGCTATCTGGTTGTAAAGTTGCAGATGGCAGTGGTGTTATGCTCTAA 1176 0.4362 MWRPPLLPSPPPPRLASHELLPLPLSMRLLLSSSHELSQPCSCLTSSLCRCSRAASSLLAGGLSSSSLIAVSSGPLKIWDSIMTGGFEFYKMDGFPGALSVISAIDEEVKSENVDSMFHIGDISYATGFLVEWDFFLSLINPVASRVSYMTAIGNHERDYVNSGSVYITPDSASVHFTVISTEHDWSQNSEQYAWMKKDMASVNRQKTPWLIFMGHRPMYTSDHSSADKNFVATQAALVLNASRRFRYTLDLKKEEEKEQVLRKIRGHVQVIKMFVWDACKDLTLIISIVAATASLVLGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEEVEELRSQSNMTGESNIVEKNSKNPILLSGCKVADGSGVML 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01202 391 SUPERFAMILY Calcium ATPase, transmembrane domain M 274 346 IPR023298 -
Adu01g01202 391 Gene3D - 100 238 IPR029052 -
Adu01g01202 391 Pfam Calcineurin-like phosphoesterase 95 230 IPR004843 GO:0016787
Adu01g01202 391 Gene3D - 239 276 - -
Adu01g01202 391 SUPERFAMILY Metallo-dependent phosphatases 101 233 IPR029052 -
Adu01g01202 391 Pfam Ca2+-ATPase N terminal autoinhibitory domain 234 257 IPR024750 GO:0005516
Adu01g01202 391 PANTHER - 358 391 IPR000528 GO:0006869|GO:0008289
Adu01g01202 391 PANTHER - 234 273 IPR000528 GO:0006869|GO:0008289
Adu01g01202 391 PANTHER - 275 353 IPR000528 GO:0006869|GO:0008289
Adu01g01202 391 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 358 391 - -
Adu01g01202 391 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 234 273 - -
Adu01g01202 391 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 275 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01202 Adu-Chr1 24136464 24140096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01202 275 391 Primary Pumps ATPases AT5G57110 57.419 6.57e-45 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01202 K22390 - zju:107417775 226.098