Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01190 ATGATAGTTGGAAGATGTGACATTTTTCGCTGTCGCCGCCGCCGCAGCCGCTCGCGTCATACGAGCTCCCTCCACCACCGCTCTCATCGCGTTTGCTCCCTTCATCACCATCGTCGCACGAGGTCTCTCTGCCGTGCTCTTGTCTTACGAGCTCCCTCCGCTACCGCTCTCGTCGCTGCTTCTTCTCTCCTCTCCGGAGGTTCTTCATCGTCTCTTCTCATCACTGTTAGTTCAGTTGAAAATCAAAGAATACGATCCACGAGAACTCTTACGGTTGCAAATCAGCTATTGCTGCTGCAAAGAACTGAGTTTCTAAATTCTAAGGTTCTCCGGGAGCTTAACCATCCCATTGTATATTCTCTATCTCCTGGAACTAAGATGACTGGGATAACTGGGCTGATATCAATTCTCATTTTGATGTATCAAGCCTTCCCAGCCACCTCCTCTCATACTGTCCATTACTATTATCAATGGAGCTACTCCCAAAAGAGCTGGTACCTACTGCTTCCTCTCTCTGATGTATGTTTGGATGGAACATTGCCTGTCTATCACTTTCATCCTGGATCCGGATCAGGAGCCAATAGTTGGCTCAATGACTTAGAGGGAGGAGGATGGTGTAATTAA 624 0.4808 MIVGRCDIFRCRRRRSRSRHTSSLHHRSHRVCSLHHHRRTRSLCRALVLRAPSATALVAASSLLSGGSSSSLLITVSSVENQRIRSTRTLTVANQLLLLQRTEFLNSKVLRELNHPIVYSLSPGTKMTGITGLISILILMYQAFPATSSHTVHYYYQWSYSQKSWYLLLPLSDVCLDGTLPVYHFHPGSGSGANSWLNDLEGGGWCN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01190 207 PANTHER NOTUM-RELATED 173 207 IPR004963 GO:0016787
Adu01g01190 207 Pfam Pectinacetylesterase 174 207 IPR004963 GO:0016787
Adu01g01190 207 PANTHER PECTIN ACETYLESTERASE 173 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01190 Adu-Chr1 23456033 23460153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01190 174 207 Carbohydrate Esterase AT2G46930 85.294 1.15e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01190 K19882 - ahf:112800918 182.956