Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01170 ATGATGAGGCTGAAGACATATGCCGGTCTCAGTTTGATCGCAACCCTGGCTATCACATATCATGCATTTAACAGTAGAGGCCAGTTTTATCCGGCAATGGTGTATCTTTCAACTTCCAAGATCAGCTTAGTGCTTCTTCTCAACATGGGTTTGGTTATTATGTGTATTCTATGGCAGTTGACTAAAAAGGTATTCCTGGGTTCTCTTAGAGAAGCTGAGGTAGAAAGGCTTAACGAGCAATCGTGGAGGGAGGTTATGGAAATCCTCTTTGCCATTACTATTTTTAGGCAGGATTTCTCAGTTACATTTCTTGCGATGGTCACAGCGCTATTGTTGATTAAAGCTTTGCATTGGTTGGCTCAAAAGAGGGTTGAGTACATTGAGACAACTCCTACGGTGCCCATGTTGTCCCATGTTCGGATTGTATCTTTTATGGGTTTCCTTCTTCTCCTCGATAGCCTATTCTTATACAGTAATCTGAAGCATCTGCTACAAACATGGCAACCATCAGTTTCGATATTCTTCTCTTTTGAGTACATGATACTGGCAACGACAACAGTGTCGATTTTTGTAAAATATCTTTTCTATGTTAGTGACATGCTCATGGAAGGACAATGGGAAAGGAAACCAGTCTTCACATTCTACTTGGAACTTATCAGGGACTTGCTTCACTTGTCTATGTATCTGTGCTTCTTCCTCGTAATTTTTGTAAACTATGGTGTTCCTTTGCACTTAATACGGGAGCTCTATGAGACATTTAGGAACTTCAAAGTCCGTGTTGCAGATTACATACGATATCGTAAGATCACTTCAAATATGAACGACCGATTTCCAGATGCAACACCTGAAGAGCTTAATGCAAGTGATGCAACTTGCATTATCTGTCGTGAAGAGATGACTACTGCAAAGAAACTTATATGTGGACATTTGTTTCATGTTCATTGCCTCCGATCATGGTTGGAGCGGCAACATACTTGCCCTACCTGCAGAGCCCTGGTTGTTCCCCCAGAAAATGGGGCAACAGCAACTGTAGGCCAGCAAGGAGCACATCCAGATGGTCATCGACAGGGAACAGGGACTACCACTGGAAGCACAGCTCAAAATGAGGTTGGCAGTGGTGGGGCAACTGATAATTTGAGTCAGCATCAAGCCCGACTTCAAGCTGCTGCCGCAGCAGCAGCTTCAATATATGAGAAGTCTTATGTTTATCCCTCTCCAACATCTTTAGTATGCTCTCCTGGGTACACTCTTCAACCCCCAGTTCAGATGTCTATGGGCGAATCTGTTAACATGGCACTCAATGGAGAACAAGCTTCTAGTGAACAGGCACAACAGCAATTTGTTCTCCCTGGTGGACCAATGATATCCTTTCCTCAAATGGGGCACTTCCATTTTCTTCCTTCCCAAACACGCGGAGCCCCTGCGAATTATGGAGTGGAGTTTGGAGTTGACCCAAATATGCCAAGCTCTCACCTGGAAGCTCATAGAAAACTACTTCAATATCAGATTGAGATTCTGCAAAATCAGCTCAAGCTTTTGCAGAGGACAAAGGTTGAAACAGGTGTAGATGAGGGTACATCTTCATCGTCCACATCGACAGCAGATAGCAGAGGCAAGCAAATAGCATCGAGTCATGAGATTCATCGTGAAAAAGAATAA 1659 0.4346 MMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQLTKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPMLSHVRIVSFMGFLLLLDSLFLYSNLKHLLQTWQPSVSIFFSFEYMILATTTVSIFVKYLFYVSDMLMEGQWERKPVFTFYLELIRDLLHLSMYLCFFLVIFVNYGVPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATATVGQQGAHPDGHRQGTGTTTGSTAQNEVGSGGATDNLSQHQARLQAAAAAAASIYEKSYVYPSPTSLVCSPGYTLQPPVQMSMGESVNMALNGEQASSEQAQQQFVLPGGPMISFPQMGHFHFLPSQTRGAPANYGVEFGVDPNMPSSHLEAHRKLLQYQIEILQNQLKLLQRTKVETGVDEGTSSSSTSTADSRGKQIASSHEIHREKE 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01170 552 MobiDBLite consensus disorder prediction 520 552 - -
Adu01g01170 552 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Adu01g01170 552 Coils Coil 496 516 - -
Adu01g01170 552 MobiDBLite consensus disorder prediction 520 540 - -
Adu01g01170 552 MobiDBLite consensus disorder prediction 340 377 - -
Adu01g01170 552 SMART ring_2 292 329 IPR001841 -
Adu01g01170 552 SUPERFAMILY RING/U-box 272 336 - -
Adu01g01170 552 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Adu01g01170 552 Pfam Ring finger domain 291 330 IPR001841 -
Adu01g01170 552 CDD RING-H2_synoviolin 289 330 - -
Adu01g01170 552 PANTHER - 1 460 - -
Adu01g01170 552 MobiDBLite consensus disorder prediction 353 377 - -
Adu01g01170 552 PANTHER RING ZINC FINGER PROTEIN 1 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01170 Adu-Chr1 22296032 22300899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01170 1 546 C3H Transcription Factor Family AT3G16090 63.370 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01170 K10601 - gmx:100816441 842.802