Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01168 ATGGGAAAGGAAGATAAAGTTAAGTCCAAGGTTGACAGTTCCGGCAAGAACGTGAGAAGCTGCAAGGGTGTTCGCACCATGGGAGGCACATTAGGCATTAATCGTGCTGTAATTGTGCGGATGGAGGCTAAACTAGATGATGGAGTTAACCGAGGTGTTGGAATTCAAGAGGATGGGGTGGAGGGAGAAGCCATTGAATATCGAGACGTGCTAATGCTGACTGAAGCAGATATGATGAGGAAGGTGTTCTGCACGGACGAAGTTGCCCATGAGTTTTATAAGAGATACGGCAAATGCATGGGGCTGAGGCAGTGCAAACATTACAAAAGGCTTGACAGGAAGAGGGATCACAGATCGGAGACGCGCACAAACTGTGATGCAAAGCTGTCAATCTTATGGGATGAGGTCAGCAAACTTTGGAGCATTAGAAAAGTTATACTAGATCACAACCATGATTTAACTCCTATGAGGATGGTTCATATGATCAACAGCTTTAGAGACATGAATTGTTCAGCTAAGGCACAGATTAATGGCATGCAGGGACACGGTGTCCCGACATCAAAGATCCTAGGTTATATAGCAGGGCAAGCCGGGGGGTATTCTTTGATGGGTTTCACGAAAAAGGATGCCTATAACTACATCGAGAAGACCAAGCGGGAGAAGATTGTTGATGGAGACGCTAACGTCGCAATAATTTATTTAGAGGGAAAAGCAGTGTCGGATCCGATGTGCATGGCTAGGTGCAATTTGACGGACAACAATATGTTAGCGAACTTGTTTTGGGCTGATGGTGGGAGCCGGGTTGATTACCAACACTTTGGTGATGTGCTTTCCTTCGATTCGACTTACAAGAAAAATAAATATAGGAGACCTTGGGTAATCTTTTTTGGTTCGAACAATCATAAGAAAACAACCATATTTGAGTTTGGTTTGGTGTTGGATGAAAGCATTGAGTCATACACATGGTTGCTTGAAAATTTGTTGGAGGTAATGTGCAACAAAAAGCCATCGGTGATTGTGACAGACGGGTGTGACTCAATGAGGGCAGCAATCAAGGCGGTGTTTCTGGAGGCCACACATAGGCTGTGTGCTTGGCATGTGGAGAAGAACGTGACTTTGAATGTGGAGGATGAAGGCTTAAGACAACTTTTCACTAGGCACAGTGTTCTTGAGTTGGTGCAGAATGTTGAGTTTATGGTACGAGAGTATCAGAATAACGAGTTAGAGGCCCACTTCAAGTCCATTCACGATAACCCAGTGATCGCGACTTGCTTGGACCCACTCGAGCGGTTTGCTGCCAATGTTTACCCACAAGAGTTATTCTTGGACGTGAGGAGGGAAATTGAAGGTGTTCGTGCGGTTATCTTTGTCGCAAAGGTTCGCCGATCCACGACTATGGTATACACAGTTGAAGACTACGGCATTCCGGGTAGGCCACTAACGTTACTGTATGATAGGGTTGTGAATAGAGTTCAATGTCCTTGCCAATTTTGGTTGCGAAAGGGTTATCCGTGTCGACACATATTTTTCGTTTTGAAGCATGAGCATGTAAGGAAAATTCCATCAAGGTTGGTGCTGAAGAGGTGGTGTAAGGACGCTAAATCATTGGATAACTATGCTGCATATTGCCCGGGTTTGTTTAACACAACGATGAGTGGCATACGAGCTTTATGTGAACAAATTGAGGCTGCTTGCGATCAGAAGGGTCCGTCGGCAAAGGGAAGAGATACTCCCAGTGTGAAGGATCCTGTGGTGGTTAAGATCAAAGGGGCTCCCCGGATTAAGAAAATGAGTGGTAGGAAGAGGCGGTGTAACATGTGCCGAAAAGCCGGACACACGAAGTGA 1845 0.4547 MGKEDKVKSKVDSSGKNVRSCKGVRTMGGTLGINRAVIVRMEAKLDDGVNRGVGIQEDGVEGEAIEYRDVLMLTEADMMRKVFCTDEVAHEFYKRYGKCMGLRQCKHYKRLDRKRDHRSETRTNCDAKLSILWDEVSKLWSIRKVILDHNHDLTPMRMVHMINSFRDMNCSAKAQINGMQGHGVPTSKILGYIAGQAGGYSLMGFTKKDAYNYIEKTKREKIVDGDANVAIIYLEGKAVSDPMCMARCNLTDNNMLANLFWADGGSRVDYQHFGDVLSFDSTYKKNKYRRPWVIFFGSNNHKKTTIFEFGLVLDESIESYTWLLENLLEVMCNKKPSVIVTDGCDSMRAAIKAVFLEATHRLCAWHVEKNVTLNVEDEGLRQLFTRHSVLELVQNVEFMVREYQNNELEAHFKSIHDNPVIATCLDPLERFAANVYPQELFLDVRREIEGVRAVIFVAKVRRSTTMVYTVEDYGIPGRPLTLLYDRVVNRVQCPCQFWLRKGYPCRHIFFVLKHEHVRKIPSRLVLKRWCKDAKSLDNYAAYCPGLFNTTMSGIRALCEQIEAACDQKGPSAKGRDTPSVKDPVVVKIKGAPRIKKMSGRKRRCNMCRKAGHTK 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01168 614 Pfam SWIM zinc finger 488 512 IPR007527 GO:0008270
Adu01g01168 614 MobiDBLite consensus disorder prediction 1 15 - -
Adu01g01168 614 MobiDBLite consensus disorder prediction 1 21 - -
Adu01g01168 614 PANTHER OS01G0607050 PROTEIN 81 375 - -
Adu01g01168 614 Pfam MULE transposase domain 276 370 IPR018289 -
Adu01g01168 614 PANTHER OS01G0607050 PROTEIN 386 535 - -
Adu01g01168 614 ProSiteProfiles Zinc finger SWIM-type profile. 484 516 IPR007527 GO:0008270
Adu01g01168 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 386 535 IPR031052 GO:0006355
Adu01g01168 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 81 375 IPR031052 GO:0006355
Adu01g01168 614 Pfam FAR1 DNA-binding domain 105 154 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01168 Adu-Chr1 22170539 22173993 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g01168 MULE 1.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01168 - - ahf:112758792 607.446