Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01166 ATGGACAAAAAAATACACGCCTCAGTTAAGAAGGCTTTTGTGTCTCGATTCGTGAATTTGCTGGAGGAAGGAATATCTTACCAAATAAGATATTTTGGTGTTGGACTCAATAAGGGTTACTTCAAGACTACACATCATGAATACGTTGTTAATTTAAACCAACGTACTGATGTGCACAGACTTCCAGAATCGTCGAGTATCCCACGATATGAATTTAAGTTTGTGAGTTTTGACACTCTCAATGCTCCTGGGTATGATTGCACCTATTTAGTTGATGTTGTTGGATATCTTGCTGGAATTGGGAATGAGAAGACTCTTGAAAAGAATGGCAAATCTACCAAATATACTGTTATCGAATTAGAGATTGATGATGGAAAAATAATGGAGTGTGCACTTTTTGGCAACTATGCACATGAATTAAATGCTTTTCTGGGATCTGGCAATAAGGATGGAGCTGTTGTCGTCTTACAGTTTGTTAGAGTGAAGTTATTTAACGAAAAGATTGTTTTACAAAATTCCATGTATGGCACAAAGATGTTCTTCAATCTTGAAGATACAACTGTCATCCAATTTAAAAATAGCTTTGTAAGATTTGAAGAATCTAGAGGTAACATCGGCGGAATTCCAAATGAGGCTGCATTCTTAAAAATTTATCAAGGCAAAACCATCGAGCAGTTAAAAGAATTCGAAACGACTGGTGGTACGGCCAATGTGAATGCAACAGTCTTTGACAAGGAGGCAAAACAAATTTTGGGAAAGAGCTGTGTAGAGATACTTGATCCACTTCTATTGAAAGGAGATCTATCGGATACACCTACACTTTTGCTCAACCTAATTGATAAGACCTTTCTCTTCATCGTTGAAGTTCAAATATCTGATAATCCACATTTTTCACCTTCTTATAAAGTTAAGAAGATGACTGATAATGTGGACCTCATAAATAAATTCAAAGAGGCTCACCCTATTCAAATTGATGTTGACTACACCGGTGGTTTGCTTCCAATTTCAAAAACATCCTCAATCATTGAAGGGGAGAAAGTAAAAGGTGCTAAGAATTTGTTGCTTGAATTCTCCAATGAACTTCGCCTAATTCCACCAAGTTTCCATGAGTAG 1113 0.3657 MDKKIHASVKKAFVSRFVNLLEEGISYQIRYFGVGLNKGYFKTTHHEYVVNLNQRTDVHRLPESSSIPRYEFKFVSFDTLNAPGYDCTYLVDVVGYLAGIGNEKTLEKNGKSTKYTVIELEIDDGKIMECALFGNYAHELNAFLGSGNKDGAVVVLQFVRVKLFNEKIVLQNSMYGTKMFFNLEDTTVIQFKNSFVRFEESRGNIGGIPNEAAFLKIYQGKTIEQLKEFETTGGTANVNATVFDKEAKQILGKSCVEILDPLLLKGDLSDTPTLLLNLIDKTFLFIVEVQISDNPHFSPSYKVKKMTDNVDLINKFKEAHPIQIDVDYTGGLLPISKTSSIIEGEKVKGAKNLLLEFSNELRLIPPSFHE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01166 370 CDD RPA1_DBD_B_like 92 195 - -
Adu01g01166 370 Pfam Domain of unknown function DUF223 4 78 IPR003871 -
Adu01g01166 370 Gene3D - 66 201 IPR012340 -
Adu01g01166 370 Gene3D - 226 318 IPR012340 -
Adu01g01166 370 PANTHER REPLICATION FACTOR A 1, RFA1 47 324 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu01g01166 370 SUPERFAMILY Nucleic acid-binding proteins 72 195 IPR012340 -
Adu01g01166 370 SUPERFAMILY Nucleic acid-binding proteins 4 66 IPR012340 -
Adu01g01166 370 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 47 324 - -
Adu01g01166 370 Gene3D - 1 63 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01166 Adu-Chr1 21907234 21913768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01166 4 139 Core DNA Replication Machinery Family AT2G06510 26.619 5.91e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01166 - - ahf:112722049 471.085