Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01154 ATGAAGAGTATAGTGGAAAATGATGATGGCGGTGTTGAGCTTAATAATGAAAACAACTGGTTGGGGTTTTCACTCTCTCCACACCATCATGTTGATTCTTCTTCTTCCTCTTCTGCTGCTTCTGTTCCTCCAACAAGCTTCTACATGAACCACCATGCTTCTCATCTTAGCAGCTATGGATTCTACTACGGAATTGAACCTGACAACAATAATAGTAACGTTAGCCTGTATTCTGGTTTTCCAGTTATGCCCCATAAATCTGATGGCACCCTCTACGGAATGGAGCCTCTCATCAACAGGTCACACCCACAACAAGTGATTGGTTCAAGTTCAACGCCAAAACTGGAGAATTTGTTAGGTGGCGGCGATTTGATGGAGACACCTCATCATCACTATGAATGTAGTGTAGGTGTAGCGGAAGCAATGCCTCTCAGCCTGGACACCATTTTTCACAGAAACAACAACCACCAACCACACTTGTCATACTACCAGGGGCTTCTAGAAGGTTCCAACAAGCAAAGTACGCAAGCTTCAGACAATCTCAAGAACTGGGGGGTGATTGAGGTGAATAATAATGGAGGTGGTGAATTATTAGGAGCTTCTTCAATTGGAACAATGAGTTATGGGGGGGAGTTGCAGTCTTTGAGCTTGTCAATGAGTCCGAGCTCGCAATCGAGCTGCGTCACGAGTTCGCAGCAGCGTGTGAGTGTTGTTGGCAGCATGGATGCAACAAAGAAGAGGGGTTCTGAAAAGGTTCAACACAAGCATATTGTTCATAGAAAATCCATTGACACGTTTGGCCAAAGAACCTCACAGTATAGAGGTGTAACAAGGCATAGATGGACTGGTAGATATGAAGCACATCTATGGGACAATAGCTGCAAGAAAGAAGGCCAAAGTAGGAAAGGAAGGCAAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATATGGCGGCACTCAAGTACTGGGGACCCTCCACGCACATTAACTTCCCTTTGGAAAATTATCAAAATCAACTTGAGGAAATGAAGAACATGACCAGACAAGAATATGTTGCTCATTTAAGAAGAAAAAGCAGCGGATTCTCAAGGGGAGCTTCAATGTACAGAGGAGTAACTAGCAGGCATCACCAACATGGAAGGTGGCAAGCTCGAATTGGAAGGGTAGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGCACACAAGAGGAAGCAGCAGAAGCTTATGACATTGCAGCCATAAAATTCAGAGGGGTTAATGCCGTAACAAACTTTGACATAACAAGATATGATGTCGAAAAAATCATGGCAAGCAACAACCTTCTAAGCAGTGAGCTAGCACGGCGGAACAAAGAGGTTCTCGTTGGCAGAGCCGGCAAGTTTAGTAACAACCTTGATAACCAAAGCCAAGAATCGATTCTAATGCAAATCAGCCAGAGCCAGCCAAGACTGGAGGCAATAGACAATGTGTTTTTTCAAGAAGTGGAGGATCCGAGCAAGATTTATGCGCATTTGCATAATGCGCATGCATCGGATCCTTCTTCGCTGGCAACGAGCTTGAACAGCTCAAGAGAAGGTAGCCCTGAAAACAGGACAAGCTTGCCAATGCTCTCTGCCGGAGGAGTAGCTTCTACCAAGCTATTGGCAGCCGCGGCAACTATTCCGGTGCTTTCTTTGCCTCAGATGCCCGTTTTTGCCGCTTGGACAGATGCTTAG 1728 0.452 MKSIVENDDGGVELNNENNWLGFSLSPHHHVDSSSSSSAASVPPTSFYMNHHASHLSSYGFYYGIEPDNNNSNVSLYSGFPVMPHKSDGTLYGMEPLINRSHPQQVIGSSSTPKLENLLGGGDLMETPHHHYECSVGVAEAMPLSLDTIFHRNNNHQPHLSYYQGLLEGSNKQSTQASDNLKNWGVIEVNNNGGGELLGASSIGTMSYGGELQSLSLSMSPSSQSSCVTSSQQRVSVVGSMDATKKRGSEKVQHKHIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDMAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTSRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASNNLLSSELARRNKEVLVGRAGKFSNNLDNQSQESILMQISQSQPRLEAIDNVFFQEVEDPSKIYAHLHNAHASDPSSLATSLNSSREGSPENRTSLPMLSAGGVASTKLLAAAATIPVLSLPQMPVFAAWTDA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01154 575 ProSiteProfiles AP2/ERF domain profile. 371 430 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 177 573 - -
Adu01g01154 575 ProSiteProfiles AP2/ERF domain profile. 272 335 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 SMART rav1_2 371 436 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 SMART rav1_2 272 341 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 SUPERFAMILY DNA-binding domain 370 431 IPR016177 GO:0003677
Adu01g01154 575 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 173 - -
Adu01g01154 575 CDD AP2 370 432 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 MobiDBLite consensus disorder prediction 515 540 - -
Adu01g01154 575 Gene3D AP2/ERF domain 371 432 IPR036955 GO:0003700|GO:0006355
Adu01g01154 575 Gene3D AP2/ERF domain 271 337 IPR036955 GO:0003700|GO:0006355
Adu01g01154 575 CDD AP2 271 335 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 177 573 - -
Adu01g01154 575 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 173 - -
Adu01g01154 575 PRINTS Ethylene responsive element binding protein signature 273 284 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 PRINTS Ethylene responsive element binding protein signature 412 432 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 Pfam AP2 domain 372 422 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 Pfam AP2 domain 272 327 IPR001471 GO:0003700|GO:0006355
Adu01g01154 575 SUPERFAMILY DNA-binding domain 271 337 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01154 Adu-Chr1 21132573 21137427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01154 1 575 AP2-EREBP Transcription Factor Family AT4G37750 48.232 7.31e-158 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Adu01g01154 AP2 7.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01154 K09285 - gmx:100792451 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00559 05 6091876 6095022 Adu01g01154 01 21132573 21137427 PCT