Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01127 ATGGGTGCTCCTAAACAGAAATGGACTGCAGAAGAAGAAGCAGCACTTAAAGCTGGAGTAGTCAAACATGGAGCAGGAAAATGGCGCACTATACTTACAGATCCAGAGTTTAGTGCCATCTTGCGCATGCGCTCCAATGTAGACCTCAAGGATAAATGGAGGAATATAAATGTCACAGCAATATGGGGATCCCGGCAGAAGGCCAAGCTAGCCCTTAAAAAGAACTTACTACTACCAGCCCCTAAAATCGACAACAATCATATGGCCTTGAGTACAGCAGTTCGACATGATGAAAATGTTCTCGAAACTAAGCCCCTAGCAATATGTGGTCTGTCATTGCCATCTCATAATTCAAAACAACAATTGTCAAGGTTAGAAAGTTTCCTCTATTTTCTATCTGAAAATTATCAATCTCCTACAAACCTTGCAAAGTTACTGCGAACAAGACTGAAGCATATGGTGGATATTGGCAAAATAATCAAGGTACAACAGAGGTACAAGATTAGTCCAAGTTCGACAGGCTCTGAGAAAAGAAGATACTCTTCTTCCACTTTACTGCAGGAAGGGAGGCCCAGAGATTCTCCAGAAGCAGAGAAGAGTCATGATGTCAACATCCTTTCAAAATCCCAAGTTGATGCGGATATATCGAAAGCAAAGAGCATGACAGCTCAAGAGGCAGCTGCGGCAGCTGCAAAGGCAGTTGCAGAGGCAGAAGCCGCCATTGCTGAAGCAGAGTTAGCAGCGAGGGAGGCAGAGGCTGCAGAAGCTGAGGCAGAGGCCGCTCATGTGTTTGCAAAAGCAGCAATGAAGGCACTAAAATGCAAAACATCTCTTGTCTGGTAG 843 0.446 MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPEFSAILRMRSNVDLKDKWRNINVTAIWGSRQKAKLALKKNLLLPAPKIDNNHMALSTAVRHDENVLETKPLAICGLSLPSHNSKQQLSRLESFLYFLSENYQSPTNLAKLLRTRLKHMVDIGKIIKVQQRYKISPSSTGSEKRRYSSSTLLQEGRPRDSPEAEKSHDVNILSKSQVDADISKAKSMTAQEAAAAAAKAVAEAEAAIAEAELAAREAEAAEAEAEAAHVFAKAAMKALKCKTSLVW 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01127 280 PANTHER SINGLE MYB HISTONE 4 1 126 IPR044597 GO:0003691
Adu01g01127 280 CDD SANT_TRF 6 57 - -
Adu01g01127 280 Gene3D - 2 59 - -
Adu01g01127 280 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 86 170 IPR005818 GO:0000786|GO:0003677|GO:0006334
Adu01g01127 280 PANTHER MYB TRANSCRIPTION FACTOR 131 276 - -
Adu01g01127 280 PANTHER MYB TRANSCRIPTION FACTOR 1 126 - -
Adu01g01127 280 SUPERFAMILY Homeodomain-like 2 67 IPR009057 -
Adu01g01127 280 PANTHER SINGLE MYB HISTONE 4 131 276 IPR044597 GO:0003691
Adu01g01127 280 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Adu01g01127 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Adu01g01127 280 MobiDBLite consensus disorder prediction 170 201 - -
Adu01g01127 280 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Adu01g01127 280 SMART sant 4 59 IPR001005 -
Adu01g01127 280 MobiDBLite consensus disorder prediction 170 189 - -
Adu01g01127 280 Coils Coil 227 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01127 Adu-Chr1 19822360 19825291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01127 1 275 Single Myb Histone (SMH) Gene Family AT5G67580 48.649 6.02e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu01g01127 Myb_DNA-binding 7.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01127 K09422 - gmx:100779583 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00575 05 6303890 6308516 Adu01g01127 01 19822360 19825291 PCT