Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01124 ATGGATACGCTGTTTAGGCTAGATCCACCGTCCCTAAACTCCACAACAACATCATCAGCCAACTCTCATCAAAATTATTATTATTATTATGACCAACACCAACTAGAGGAAGAAGCTGAAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTATCCTCTTCTTCTTCAAAGCAACAAGAACAATATTACCCTTATTATAACCAATTACAACCCCACTACCATTTATTATCATCCACTACCACTACTCATCATGATTTATCGTCAACATCATTCTTACCACCCACTCCACCACCATCAGATTTCAACTTTGAATTCTCATCAGGCTCGTGGGCACCCAACATCCTCCTCGACACCGCACGTGCCATCGCTGACAACAACACCACGCGACTGCATCAACTCCTATGGATGCTCAACGAGCTAAGCTCTCCATACGGCGACACAAACCAAAAACTCGCCGCGTATTTTCTTCAAGCCTTGTTCAGCCGCATAACCACCGTCGGCGAACGAACCTACCGAACCTTAACGTTAGCTTCGGACAAGACTTGCTGTTTCGAGTCCACCAGAAAGACGGTTCTCAAGTTCCAGGAGGTTAGTCCCTGGACCACGTTTGGACACGTGGCGTCCAATGGCGCCATCTTAGAGGCTCTCGATGGGGAGCTCAACTTGCACATTGTGGATTTCAGCAACACGTACTGCACACAGTGGCCAACGCTTCTTGAAGCCTTGGCCACTCGTAGCGACGACACCCCGAACCTCCGCTTAACCACCGTCGTCACCACCAGACCTGGTGACTCTGGCGACGCTGTTCAGAGGGTCATGAAGGAAATAGGTACAAGGATGGAGAAATTTGCGAGGCTAATGGGAGTTCCGTTCAAATTCAACGTCGTTTGCCACGTCGGCGATCTCTCCAATCTCAACTTCGGCGATTTGGACATCAAGAACGAGGAGGCCTTAGCCATCAACTGCGTGAACACGCTCCACGCGATCACACCCGTCGGGAACCACCGTGACACGTTGATATCATCGCTGGCGAGGCTAAACCCTCGGATCGTGACGGTGGTGGAAGAAGAAGCGGATCTGGACGTTGGCGTCGAAGGCCAGGAGTTCCTTAAAGGGTTCGAGGAATGCGTGAAGTGGTTTAGGGTTTACATGGAGGCGCTGGATGAGAGCTTTACAAGGACGAGTGGGGAGAGGCTGATGCTGGAAAGGGCGGCGGGGAGGGCGATTGTGGACCTGGTGGCGTGTACGGCGGCGGAATCGGTGGAGCGGAGGGAGACGGCCGTGAAATGGTCGCAGAAAATGAGGGAAGGTGGAAGGTTGAATAGGATGCCGTTTAGCGAGGAGGTGTGTGATGACGTCAGAGCATTGTTGAGAAGGTATAGGGAAGGGTGGTCGATGGCACAGTGTTCCGATAACGGAGTATTTCTTTGTTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAAGCCGTAG 1482 0.5135 MDTLFRLDPPSLNSTTTSSANSHQNYYYYYDQHQLEEEAEEECFNFFMDEEDLSSSSSKQQEQYYPYYNQLQPHYHLLSSTTTTHHDLSSTSFLPPTPPPSDFNFEFSSGSWAPNILLDTARAIADNNTTRLHQLLWMLNELSSPYGDTNQKLAAYFLQALFSRITTVGERTYRTLTLASDKTCCFESTRKTVLKFQEVSPWTTFGHVASNGAILEALDGELNLHIVDFSNTYCTQWPTLLEALATRSDDTPNLRLTTVVTTRPGDSGDAVQRVMKEIGTRMEKFARLMGVPFKFNVVCHVGDLSNLNFGDLDIKNEEALAINCVNTLHAITPVGNHRDTLISSLARLNPRIVTVVEEEADLDVGVEGQEFLKGFEECVKWFRVYMEALDESFTRTSGERLMLERAAGRAIVDLVACTAAESVERRETAVKWSQKMREGGRLNRMPFSEEVCDDVRALLRRYREGWSMAQCSDNGVFLCWKDQPVVWASAWKP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01124 493 Pfam GRAS domain family 116 492 IPR005202 -
Adu01g01124 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 492 IPR005202 -
Adu01g01124 493 ProSiteProfiles GRAS family profile. 104 492 IPR005202 -
Adu01g01124 493 PANTHER PROTEIN SHORT-ROOT 1 492 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01124 Adu-Chr1 19730125 19732239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01124 26 493 GRAS Transcription Factor Family AT4G37650 60.040 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu01g01124 GRAS 2.2e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01124 - - gmx:100778524 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01124 01 19730125 19732239 Adu01g01124 01 19730125 19732239 ECH
Adu05g00580 05 6340066 6342303 Adu01g01124 01 19730125 19732239 PCT