Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01116 ATGGAAAACATAGTTACcagaaccaaattgatgctcgaaccagtcagACCACTCACAATCCCCGGTTTCACCCTCGCCACCGCAACCACCACTATCACCACGGCTCCATTACCACCACCACCACCACCACCTCCACCACCTACTTGTCCCCCTCCATCACCGCCGCCGCGTCCTCCTCCGCCACCACCACCACCACCACCTCCTCGTCCTCCTCCACAGACACGGTTGATAAGAGCACGAGGAGTACTTCTAAAATTCAAGAAATTTGAAATCGTTGACAAAACAGGGTACACTAATAACTGGAAAGGCTCAAATCCATGCAAGTACAATGGGATAAGGTGCGCCACATATCCAAACTCAAAGGAGACAGCTGTGGCCGGAATAGACCTCAACCAAGCCCAGATCACCGGTGTTAAAAACGGAACATTGAAGCTTTCCGATGTCTTGGGCGAAATTCCAGAGCTCACATTCTTCCACGTTAACTCTAACGGCTTCGGCGGCAACCTCCCAGACTTATCCGTTAAAAAGTTCAAGTATTTCTACGAACTTGACCTCAGCAACAACAAGCTCTCAGGTGCGTTCCCAATGCAAGTTCTTCAGGCTACGAATCTAACATTCCTGGACATTAGGTTCAACCAACTCTCCGGCCCAATTCCACCGGAACTCTTCGTCCAAGATCTCGATGTTATCTTCATCAACAACAACTTCTTCTCCGGCAACCTCCCTAGTAATTTCGGCTCAACTCCTGCCAGGTACCTCACGTTCGCCAACAATCAATTTAGCGGCACGATCCCAAGCAGCATTGGTAAAGCTTCGAAGACGCTAACCGAAGTGCTGTTCTTGGGGAACAACCTTGACGGATGCCTGCCCTACGAGATAGGCTTGCTCGGCAAGGCGACAGTCTTTGATGCGAGCAAGAACATCATTACGGGTCCCATTCCTCACTCTTTCGGATGTTTAAAAAGCATTCAGTTCCTCAACCTTGCAAGCAACCAGCTGTACGGTGCAGTTCCGGAGATCGTCTGCATTCTCCCGGGGCTCCGCAACAACGGCAACTTGTCGTTGTCGGACAACTACTTTACCCAAGTTGGTCCTGAGTGCTTGAAGCTGATAGAGAACAAGGTTCTTGACGTCAACAATAACTGCATCTTGGGGCTTCCTAATCAAAGATCACCGGAAGAATGCCACGCATTCTTTTCCAATGTGAAACCATGCTCTAACCCCAAATTTTTCCATTACATCCCTTGCAAAACGTACTACTCGCAGTTACACTCCCAAGCCGCAGCGGCGCCGCTGCTTCAAGAAGATAGTTCTTTCTATTCTTCACCGCCTGAGCCGGTAACCTATAAGACTCTCAGACCTCATCGCTTATGA 1374 0.4847 MENIVTRTKLMLEPVRPLTIPGFTLATATTTITTAPLPPPPPPPPPPTCPPPSPPPRPPPPPPPPPPPRPPPQTRLIRARGVLLKFKKFEIVDKTGYTNNWKGSNPCKYNGIRCATYPNSKETAVAGIDLNQAQITGVKNGTLKLSDVLGEIPELTFFHVNSNGFGGNLPDLSVKKFKYFYELDLSNNKLSGAFPMQVLQATNLTFLDIRFNQLSGPIPPELFVQDLDVIFINNNFFSGNLPSNFGSTPARYLTFANNQFSGTIPSSIGKASKTLTEVLFLGNNLDGCLPYEIGLLGKATVFDASKNIITGPIPHSFGCLKSIQFLNLASNQLYGAVPEIVCILPGLRNNGNLSLSDNYFTQVGPECLKLIENKVLDVNNNCILGLPNQRSPEECHAFFSNVKPCSNPKFFHYIPCKTYYSQLHSQAAAAPLLQEDSSFYSSPPEPVTYKTLRPHRL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01116 457 Pfam Leucine rich repeat N-terminal domain 82 114 IPR013210 -
Adu01g01116 457 Gene3D Ribonuclease Inhibitor 250 406 IPR032675 -
Adu01g01116 457 PANTHER BNAC05G26270D PROTEIN 54 431 - -
Adu01g01116 457 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 54 431 - -
Adu01g01116 457 SUPERFAMILY L domain-like 97 386 - -
Adu01g01116 457 SUPERFAMILY Formin homology 2 domain (FH2 domain) 58 68 - -
Adu01g01116 457 MobiDBLite consensus disorder prediction 34 73 - -
Adu01g01116 457 Gene3D Ribonuclease Inhibitor 78 249 IPR032675 -
Adu01g01116 457 MobiDBLite consensus disorder prediction 32 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01116 Adu-Chr1 19447210 19451780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01116 75 400 Leucine-rich Repeat extension Gene Families AT4G13340 45.260 3.85e-82 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01116 - - ahf:112800345 800.045