Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g01115 ATGAAAACTCATCATTGGAGCTGCTTCTTTATTATCTTATCATCAATAGAGTTTTGGACCATCCTCTTCTTCGCCTTTCCTTCCGCAAAAGCCCTCAAGGCATTTGAATTATGTAATAATGCTTCAAAATCTAACTCAAGAAGAATCCTACATCAGCCGCTTTTTCCGGCAGCATCAGCTCCGGCGTTACCTCCGCCTTCGCCGTCACTGGACACTCCTTCCCCTCCGGAAATTCCTTTCTTCAACGAGAATCCACCAGGTCCACCGCCGGCGGACCTGAACCAGCAGCCGGCTGCGGTGGACACCACCAACGGCCGAATTGCAAACCCGACAGCGACGCAGCCGGCGAAGCCGGTTAAGACAGTGGCGATTGTGGTATCTGTCGCGTTCGTTACGTTTGCAATGCTGTTTGTGCTGGCGTTCTTCTTGTATAAGCAAACGGCGAAGCAGCAGCCGGCGGAGACGACGCAGAAGCTGGTGGCCGTAGGGTCACGAAACGAGTTGCCACCACCGGCGGCGGCGGCGCCACCGTCTAGTTTGTACTACATTGGGACGGTGGATCCAAGCAGAGCGTCGGTGAGCGAACCGAGTGAAGAAGCCACTTCGAGTGAAATGAACCGTTCTTCATATCGAAAACTGAATTCCATGAAAGTTTCAGAAAGGTACCGTCCCAGCCCCGAGCTTCAGCCATTGCCGCCGCTAAGCAAAACCGTCGCCGACGGCAGCCATCCGCCACCGGCTGCCTCCTCGTCATCTTCGTCCGATGACGAAGTGGATAGCCGAGACACGGCGTTTCACTCGCCACAGGCCTCATCTCTCAGCCTCGATGACGGTTACCACACGCCGGTTTCGCGCCAGAGTTATCTCTCCAACGGTAGCAGTACTGCGGCGGCACCGCCAGTTCCTTTCTCGAAGAGAACTTCTCCGAAGTCTCGGATTTCAGCTTCGTCGGATACCAGAATCGCCATGATACCACCAATTAAGCATGCTCCTCCACGGTCACCATCCCCGACACAGCAAGAATCTACCTCCGGTCCTTCCAGACGGCCGACATTCTCGGCACCTCCTCCAGCACCAAATTTAACTCATATTCATTCAAATATGTCCAAGAATTCAATCAATCCTCCGCCACCGCCACCACCTCCTCCTCCGCCAATGCGAGCAGCGCCACGGAAGGTTCAGTCTCCAGCAATAAATTTGACCTCGTCATCCCAAGTTGCAGCATCCGCTGCAAAGAGCATTGCAAAGGCTTCAGAGGAGTTTAACAAGATGAAGAGCGTGGCATCATCTGAGAAGTTGGACGGTGATGACGTGGAAGGAGGAAGACCCAAGCTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACATCTGAACGTGCCACTGTGTGGGACCAGTTAAAGTCAAGTTCGTTTCAATTAAATGAGGGCATGATGGAGTCTCTCTTTGGCTGCGGTGCCACCAGTTCTGCACCTAAAGAAACGGTTACAAGGAAATCAGTTATTCCGCCCGTTGAACAGGAGAACAGAGTGTTAGATCCCAAGAAGTCCCAAAACATTGCTATAATGCTCAGGGCACTCAATGTTACTAGAGATGAGGTCTCCGAAGCTCTCTTGGACGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTTGTAAAGATGGCACCAACTAAAGAGGAAGAAATAAAACTCAAAAGCTATGATGCTGGTGTTTCAAAACTAGGCTCTGCAGAGAGATTCCTTAAAACTGTACTTGACATACCATTAGCCTTCAAAAGAGTGGAAGCCATGTTGTACAGAACGAATTTTGACACAGAAGTTAACTACCTTAGGAAATCCTTTCAAACCCTCGAGACAGCGAGTGAGGAATTGAAGAACAGCCGGTTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACAGGGAACAGAATGAATGTTGGAACCTACCGTGGCGATGCCAAGGCGTTCAAGCTAGACACACTCCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTTCACTTTGTTGTCCAAGAAATCATTAGAACGGAAGGTTCAAGTGGCGAATCGTCCAGCGAAAATGCACAGGCAGAAATGAATTCTCAATTTAATGATGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGAAACGTGAAAAATGCTGCAGGAATGGACTCAGAAGTCTTAAGTAGTTATGTCTCTAAGCTTGAATCGGGTCTTGATAAAGTGAGATTGGTTCTGCAGCATGAAAAGCCGGGTATGCAGGGGAATTTCTTCAACTCAATGAAGCTCTTCCTGAAAGTCGCCGAAGCGAAAATCGTTACGATTAAATCTGATGAGAGAAAGGCTTTGTTCCTTGTGAAAGAAGTAACAGAGTACTTTCATGGGAATATGGCAAAGGAAGAAGCGCATCCTTTTAGAATTTTCATGATTGTGAGAGACTTTCTCAATATTTTGGACCAGGTCTGCAAAGAAGTGGGGAAGATGCAGGACAAAACTGTGATTAACTCCGCGAGATCCTTCAGGATAGCGGCGAGCGCGTCGTTACCAGTTCTCAACAGGTACCATGCAAGGCAAGATACAACCAGTTCAGATGAAGAGAGCTCATCTCCCTAG 2658 0.4898 MKTHHWSCFFIILSSIEFWTILFFAFPSAKALKAFELCNNASKSNSRRILHQPLFPAASAPALPPPSPSLDTPSPPEIPFFNENPPGPPPADLNQQPAAVDTTNGRIANPTATQPAKPVKTVAIVVSVAFVTFAMLFVLAFFLYKQTAKQQPAETTQKLVAVGSRNELPPPAAAAPPSSLYYIGTVDPSRASVSEPSEEATSSEMNRSSYRKLNSMKVSERYRPSPELQPLPPLSKTVADGSHPPPAASSSSSSDDEVDSRDTAFHSPQASSLSLDDGYHTPVSRQSYLSNGSSTAAAPPVPFSKRTSPKSRISASSDTRIAMIPPIKHAPPRSPSPTQQESTSGPSRRPTFSAPPPAPNLTHIHSNMSKNSINPPPPPPPPPPPMRAAPRKVQSPAINLTSSSQVAASAAKSIAKASEEFNKMKSVASSEKLDGDDVEGGRPKLKALHWDKVRATSERATVWDQLKSSSFQLNEGMMESLFGCGATSSAPKETVTRKSVIPPVEQENRVLDPKKSQNIAIMLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKSYDAGVSKLGSAERFLKTVLDIPLAFKRVEAMLYRTNFDTEVNYLRKSFQTLETASEELKNSRLFLKLLEAVLRTGNRMNVGTYRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRTEGSSGESSSENAQAEMNSQFNDDEFRKKGLQVVAGLSRDLGNVKNAAGMDSEVLSSYVSKLESGLDKVRLVLQHEKPGMQGNFFNSMKLFLKVAEAKIVTIKSDERKALFLVKEVTEYFHGNMAKEEAHPFRIFMIVRDFLNILDQVCKEVGKMQDKTVINSARSFRIAASASLPVLNRYHARQDTTSSDEESSSP 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g01115 885 SMART it6_source 435 848 IPR015425 -
Adu01g01115 885 Pfam Formin Homology 2 Domain 442 833 IPR015425 -
Adu01g01115 885 MobiDBLite consensus disorder prediction 189 404 - -
Adu01g01115 885 MobiDBLite consensus disorder prediction 372 390 - -
Adu01g01115 885 ProSiteProfiles Formin homology-2 (FH2) domain profile. 435 859 IPR015425 -
Adu01g01115 885 PANTHER FORMIN-LIKE PROTEIN 3 885 - -
Adu01g01115 885 MobiDBLite consensus disorder prediction 62 97 - -
Adu01g01115 885 MobiDBLite consensus disorder prediction 264 318 - -
Adu01g01115 885 SUPERFAMILY Formin homology 2 domain (FH2 domain) 375 847 - -
Adu01g01115 885 MobiDBLite consensus disorder prediction 62 93 - -
Adu01g01115 885 Gene3D Formin, FH2 domain 437 845 IPR042201 -
Adu01g01115 885 MobiDBLite consensus disorder prediction 190 215 - -
Adu01g01115 885 PANTHER FORMIN-RELATED 3 885 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Adu01g01115 885 MobiDBLite consensus disorder prediction 334 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g01115 Adu-Chr1 19367568 19372214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g01115 416 876 FH2 protein (formin) Gene Family AT5G67470 72.414 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g01115 - - gmx:100803578 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01115 01 19367568 19372214 Adu01g01115 01 19367568 19372214 ECH
Adu05g00595 05 6460610 6464434 Adu01g01115 01 19367568 19372214 PCT